Genome ID:GCA_028864795.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 34 | 25 | 42.20 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| CFJCMAAE_1 | 353260 | 354099 | cbpD | 0.0 | Autolysin | Exoenzyme | 100.00 | 100.00 | WP_011226733 |
| CFJCMAAE_1 | 1618073 | 1618924 | rfbD | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_014621820 |
| CFJCMAAE_1 | 1429076 | 1429837 | srtA | 0.0 | Sortase A | Exoenzyme | 100.00 | 100.00 | - |
| CFJCMAAE_1 | 1271533 | 1272456 | STR_RS05205 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227237 |
| CFJCMAAE_1 | 1273387 | 1274469 | STR_RS05215 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227239 |
| CFJCMAAE_1 | 1274559 | 1275533 | STR_RS05220 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227240 |
| CFJCMAAE_1 | 1279015 | 1279614 | STR_RS05245 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_196767671 |
| CFJCMAAE_1 | 1393738 | 1394331 | STR_RS05880 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226149 |
| CFJCMAAE_1 | 1605598 | 1607343 | STR_RS06885 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227426 |
| CFJCMAAE_1 | 1607345 | 1609045 | STR_RS06890 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_041827077 |
| CFJCMAAE_1 | 1610265 | 1611071 | STR_RS06900 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227429 |
| CFJCMAAE_1 | 1611071 | 1612012 | STR_RS06905 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227430 |
| CFJCMAAE_1 | 1612009 | 1613157 | STR_RS06910 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227431 |
| CFJCMAAE_1 | 1162418 | 1164076 | fbp54 | 0.0 | FBPs | Adherence | 99.94 | 100.00 | WP_011227179 |
| CFJCMAAE_1 | 1281941 | 1283395 | STR_RS05265 | 0.0 | Capsule | Immune modulation | 99.93 | 100.00 | WP_041827043 |
| CFJCMAAE_1 | 1609063 | 1610265 | STR_RS06895 | 0.0 | Capsule | Immune modulation | 99.92 | 100.00 | WP_011227428 |
| CFJCMAAE_1 | 1279751 | 1280500 | STR_RS05250 | 0.0 | Capsule | Immune modulation | 99.87 | 100.00 | WP_011227246 |
| CFJCMAAE_1 | 1270105 | 1271525 | STR_RS05200 | 0.0 | Capsule | Immune modulation | 99.86 | 99.93 | WP_011227236 |
| CFJCMAAE_1 | 1281210 | 1281940 | STR_RS05260 | 0.0 | Capsule | Immune modulation | 99.86 | 99.86 | WP_011227248 |
| CFJCMAAE_1 | 1393738 | 1394331 | STER_RS06030 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011226149 |
| CFJCMAAE_1 | 1393738 | 1394331 | STU_RS15260 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011226149 |
| CFJCMAAE_1 | 1276210 | 1277326 | STR_RS05230 | 0.0 | Capsule | Immune modulation | 99.82 | 99.82 | WP_148148887 |
| CFJCMAAE_1 | 1267354 | 1268411 | waaB | 0.0 | Capsule | Immune modulation | 99.81 | 99.91 | WP_157822584 |
| CFJCMAAE_1 | 1277894 | 1278852 | STR_RS05240 | 0.0 | Capsule | Immune modulation | 99.79 | 99.90 | WP_041827042 |
| CFJCMAAE_1 | 1275539 | 1276017 | STR_RS05225 | 0.0 | Capsule | Immune modulation | 99.79 | 99.79 | WP_041827041 |
| CFJCMAAE_1 | 1607345 | 1609045 | STER_RS07050 | 0.0 | Capsule | Immune modulation | 99.71 | 100.00 | WP_041827753 |
| CFJCMAAE_1 | 1280510 | 1281201 | STR_RS05255 | 0.0 | Capsule | Immune modulation | 99.71 | 99.86 | WP_011227247 |
| CFJCMAAE_1 | 1272416 | 1273362 | STR_RS05210 | 0.0 | Capsule | Immune modulation | 99.58 | 99.58 | WP_011227238 |
| CFJCMAAE_1 | 1609063 | 1610265 | STER_RS07055 | 0.0 | Capsule | Immune modulation | 99.50 | 100.00 | WP_011681436 |
| CFJCMAAE_1 | 1610265 | 1611071 | STER_RS07060 | 0.0 | Capsule | Immune modulation | 99.50 | 100.00 | WP_011681437 |
| CFJCMAAE_1 | 1611071 | 1612012 | STER_RS07065 | 0.0 | Capsule | Immune modulation | 99.47 | 100.00 | WP_011681438 |
| CFJCMAAE_1 | 1280510 | 1281201 | STU_RS14640 | 0.0 | Capsule | Immune modulation | 99.42 | 99.86 | WP_011226047 |
| CFJCMAAE_1 | 1347702 | 1348492 | cshA | 0.0 | Cell surface hydrophobicity proteins | Adherence | 99.37 | 100.00 | - |
| CFJCMAAE_1 | 1612009 | 1613157 | STER_RS07070 | 0.0 | Capsule | Immune modulation | 99.22 | 100.00 | WP_011681439 |
| CFJCMAAE_1 | 1394331 | 1395200 | rfbA | 0.0 | Capsule | Immune modulation | 99.19 | 100.00 | WP_011681286 |
| CFJCMAAE_1 | 1281210 | 1281940 | STU_RS14645 | 0.0 | Capsule | Immune modulation | 98.77 | 99.86 | WP_011226048 |
| CFJCMAAE_1 | 1279765 | 1280500 | STER_RS05305 | 0.0 | Capsule | Immune modulation | 98.37 | 99.33 | WP_011681174 |
| CFJCMAAE_1 | 1605598 | 1607343 | STER_RS07045 | 0.0 | Capsule | Immune modulation | 98.22 | 100.00 | WP_011681434 |
| CFJCMAAE_1 | 1281210 | 1281940 | STER_RS05315 | 0.0 | Capsule | Immune modulation | 98.22 | 99.86 | WP_011681176 |
| CFJCMAAE_1 | 1281941 | 1283395 | STU_RS14650 | 0.0 | Capsule | Immune modulation | 98.01 | 100.00 | WP_011226049 |
| CFJCMAAE_1 | 1279765 | 1280500 | STU_RS14635 | 0.0 | Capsule | Immune modulation | 97.83 | 99.33 | WP_011226046 |
| CFJCMAAE_1 | 1616696 | 1617954 | STER_RS07100 | 0.0 | Capsule | Immune modulation | 97.70 | 99.92 | WP_011681445 |
| CFJCMAAE_1 | 1281941 | 1283395 | STER_RS05320 | 0.0 | Capsule | Immune modulation | 96.99 | 99.79 | WP_011681177 |
| CFJCMAAE_1 | 1280510 | 1281201 | STER_RS05310 | 0.0 | Capsule | Immune modulation | 89.75 | 99.86 | WP_011681175 |
| CFJCMAAE_1 | 906806 | 908109 | eno | 0.0 | Streptococcal enolase | Exoenzyme | 88.02 | 99.54 | WP_000022832 |
| CFJCMAAE_1 | 109085 | 110095 | plr/gapA | 0.0 | Streptococcal plasmin receptor/GAPDH | Adherence | 86.92 | 99.51 | WP_002986042 |
| CFJCMAAE_1 | 1610265 | 1611071 | SGO_RS05020 | 0.0 | Capsule | Immune modulation | 82.90 | 100.00 | WP_012000440 |
| CFJCMAAE_1 | 452776 | 454059 | tig/ropA | 0.0 | Trigger factor | Stress survival | 80.65 | 99.77 | WP_000107753 |
| CFJCMAAE_1 | 1392263 | 1393309 | rfbB | 0.0 | Capsule | Immune modulation | 80.61 | 100.00 | WP_009659423 |
| CFJCMAAE_1 | 1616001 | 1616699 | STER_RS07095 | 2.92e-152 | Capsule | Immune modulation | 81.15 | 70.35 | WP_011681444 |
| CFJCMAAE_1 | 1277602 | 1277838 | STR_RS05235* | 6.59e-119 | Capsule | Immune modulation | 100.00 | 100.00 | - |
| CFJCMAAE_1 | 1615181 | 1615647 | STER_RS07085 | 0.0 | Capsule | Immune modulation | 94.02 | 65.13 | WP_011681442 |
| CFJCMAAE_1 | 1609528 | 1610265 | SGO_RS05025 | 0.0 | Capsule | Immune modulation | 85.23 | 60.29 | WP_012000441 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| CFJCMAAE_1 | 1015134 | 1016207 | MntE | 0.0 | manganese homeostasis | 94.41 | 99.72 | ABF32167 |
| CFJCMAAE_1 | 824609 | 825577 | spr0084 | 0.0 | pathogenitcity related | 93.19 | 98.48 | AAK98888 |
| CFJCMAAE_1 | 1780182 | 1782485 | pfl2(Sp_0459) | 0.0 | formate acetyltransferase | 92.58 | 99.22 | AAK74619 |
| CFJCMAAE_1 | 1035652 | 1037898 | metE | 0.0 | methionine biosynthesis enzymes | 91.99 | 100.00 | AAK74738 |
| CFJCMAAE_1 | 372880 | 373872 | recA | 0.0 | DNA recombination and repair | 91.24 | 85.31 | AAL00560 |
| CFJCMAAE_1 | 1519740 | 1520828 | SPD_0310 | 0.0 | UPF0371 protein SPD_0310 | 90.63 | 73.48 | ABJ54480 |
| CFJCMAAE_1 | 336783 | 337754 | prsA2 | 0.0 | ribose-phosphate pyrophosphokinase | 90.12 | 100.00 | ABF36968 |
| CFJCMAAE_1 | 1666404 | 1665253 | potA | 0.0 | ABC transporter ATP-binding protein-spermidine/putrescine transport | 89.06 | 99.74 | AAL00050 |
| CFJCMAAE_1 | 1631948 | 1629966 | uvrB | 0.0 | excinuclease ABC, B subunit | 88.96 | 99.70 | AE014259_2 |
| CFJCMAAE_1 | 1416340 | 1414610 | ptsI | 0.0 | phosphoenolpyruvate-protein phosphotransferase | 87.87 | 100.00 | AAK34199 |
| CFJCMAAE_1 | 298552 | 297074 | IMPDH | 0.0 | inosine-5'-monophosphate dehydrogenase | 87.63 | 100.00 | ADE32434 |
| CFJCMAAE_1 | 283824 | 282139 | gidA | 0.0 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme | 86.48 | 88.09 | ABP91129 |
| CFJCMAAE_1 | 906806 | 908107 | Eno | 0.0 | enolase | 86.21 | 99.77 | ABP90468 |
| CFJCMAAE_1 | 1040823 | 1039114 | PGM | 0.0 | phosphoglucomutase | 83.71 | 99.65 | ACH87041 |
| CFJCMAAE_1 | 150764 | 151774 | pdh | 0.0 | pyruvate dehydrogenase | 83.09 | 99.70 | ABP91006 |
| CFJCMAAE_1 | 892388 | 893278 | bglB | 2.81e-178 | putative phospho--glucosidase | 88.55 | 99.66 | AAK33487 |
| CFJCMAAE_1 | 1432715 | 1433503 | ldh(Sp_1220) | 1.41e-174 | L-lactate dehydrogenase | 95.06 | 80.18 | AAK75326 |
| CFJCMAAE_1 | 1101437 | 1100502 | SP_0676 | 4.61e-167 | transcription facot | 81.73 | 96.89 | AAK74821 |
| CFJCMAAE_1 | 1038090 | 1038947 | metF | 8.35e-165 | methionine biosynthesis enzymes | 86.36 | 99.31 | AAK74739 |
| CFJCMAAE_1 | 1320017 | 1319316 | covR | 8.99e-129 | responder protein | 84.19 | 99.57 | AAK71319 |
| CFJCMAAE_1 | 1485684 | 1485013 | rr01 | 1.16e-125 | response regulator | 84.38 | 99.56 | CAB54566 |
| CFJCMAAE_1 | 1320017 | 1319316 | walR | 6.51e-119 | DNA-binding response regulator | 80.34 | 99.57 | ANC99504 |
| CFJCMAAE_1 | 1044775 | 1045425 | CiaR | 1.34e-116 | two-component response regulator | 86.17 | 96.88 | AAK74935 |
| CFJCMAAE_1 | 1044775 | 1045425 | ciaR | 6.89e-114 | two component system response regulator | 83.87 | 96.02 | AIK75708 |
| CFJCMAAE_1 | 1200840 | 1201241 | SpxA1 | 3.63e-66 | transcriptional regulator | 80.60 | 100.00 | ERL19273 |
| CFJCMAAE_1 | 454217 | 454717 | RopE (M5005_Spy_1611) | 1.29e-74 | probable DNA-directed RNA polymerase subunit delta | 80.84 | 87.43 | AAK34603 |
| CFJCMAAE_1 | 1780182 | 1782479 | PFL (B9H01_RS01125) | 0.0 | formate C-acetyltransferase | 82.55 | 98.08 | MYN69560 |
| CFJCMAAE_1 | 186617 | 185598 | ilvC (SPD_0406) | 0.0 | ketol-acid reductoisomerase (NADP(+)) | 96.18 | 100.00 | ABJ55451 |
| CFJCMAAE_1 | 1189478 | 1188555 | mnmE | 0.0 | central tRNA-modifying GTPase | 81.94 | 67.40 | ABP90420 |