Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| HBCFODLC_65 | 1 | 412 | cat(pC194) | Chloramphenicol | 100.00 | 63.29 | NC_002013 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HBCFODLC_65 | 2 | 409 | catA | type A-9 chloramphenicol O-acetyltransferase | PARTIAL_CONTIG_ENDX | 100.00 | 62.96 | WP_001010387.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| HBCFODLC_63 | 160422 | 159718 | WalR | 1.32e-114 | transcriptional regulatory protein | 83.83 | 100.00 | EPH95667 |
| HBCFODLC_49 | 46098 | 45904 | CspR | 2.35e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| HBCFODLC_49 | 46098 | 45901 | CspA | 3.61e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |