Genome ID:GCA_029350885.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 11 | 10 | 7 | 16.43 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HFKFMLOA_221 | 634705 | 635043 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| HFKFMLOA_221 | 634388 | 634705 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| HFKFMLOA_110 | 563365 | 564219 | aadK | ARO:3002627 | aadK | 98.24 | 100.00 | AL009126.1 |
| HFKFMLOA_110 | 544783 | 545985 | blt | ARO:3003006 | blt | 99.25 | 100.00 | L32599.1 |
| HFKFMLOA_291 | 403456 | 405099 | vmlR | ARO:3004476 | vmlR | 98.90 | 100.00 | NC_000964.3 |
| HFKFMLOA_110 | 347807 | 348976 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| HFKFMLOA_291 | 102852 | 104285 | lmrB | ARO:3002813 | lmrB | 99.58 | 100.00 | JYFL01000006.1 |
| HFKFMLOA_291 | 90043 | 90963 | mphK | ARO:3004541 | mphK | 99.35 | 100.00 | CP010314.1 |
| HFKFMLOA_302 | 27474 | 30044 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.77 | 100.00 | AL009126.3 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| HFKFMLOA_291 | 90043 | 90963 | mph(K) | Spiramycin, Telithromycin | 99.46 | 100.00 | NC_000964 |
| HFKFMLOA_110 | 563365 | 564219 | aadK | Streptomycin | 98.71 | 100.00 | M26879 |
| HFKFMLOA_167 | 1 | 1167 | tet(M) | Doxycycline, Tetracycline, Minocycline | 98.89 | 60.47 | AM990992 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HFKFMLOA_291 | 90043 | 90960 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 99.35 | 100.00 | WP_003246254.1 |
| HFKFMLOA_291 | 403459 | 405099 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.90 | 100.00 | WP_003234144.1 |
| HFKFMLOA_110 | 563368 | 564219 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.24 | 100.00 | WP_003229862.1 |
| HFKFMLOA_280 | 1016468 | 1016986 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 93.06 | 100.00 | WP_003242546.1 |
| HFKFMLOA_110 | 54132 | 56729 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 80.30 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| HFKFMLOA_280 | 515208 | 516389 | capB | 0.0 | Capsule | Immune modulation | 99.75 | 100.00 | NP_391471 |
| HFKFMLOA_110 | 150480 | 151121 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.69 | 100.00 | NP_390062 |
| HFKFMLOA_280 | 112995 | 113780 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.49 | 100.00 | NP_391080 |
| HFKFMLOA_280 | 111773 | 112969 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.33 | 100.00 | NP_391079 |
| HFKFMLOA_280 | 513583 | 514725 | capA | 0.0 | Capsule | Immune modulation | 99.12 | 100.00 | NP_391469 |
| HFKFMLOA_110 | 8385 | 10148 | dep/capD | 0.0 | Capsule | Immune modulation | 99.04 | 100.00 | NP_389723 |
| HFKFMLOA_280 | 514744 | 515193 | capC | 0.0 | Capsule | Immune modulation | 98.67 | 100.00 | NP_391470 |
| HFKFMLOA_280 | 109159 | 110097 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.62 | 100.00 | NP_391077 |
| HFKFMLOA_280 | 102003 | 109139 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.52 | 100.00 | NP_391076 |
| HFKFMLOA_280 | 110125 | 111744 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 96.97 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| HFKFMLOA_313 | 31767 | 32903 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| HFKFMLOA_335 | 11248 | 10379 | pdxS | 1.12e-151 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| HFKFMLOA_221 | 323195 | 322419 | CodY | 8.60e-125 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| HFKFMLOA_280 | 373742 | 374311 | ClpP | 6.37e-99 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| HFKFMLOA_221 | 785210 | 784818 | spxA1 | 6.76e-70 | redox-responsive transcription factor | 83.97 | 100.00 | AAF21893 |
| HFKFMLOA_221 | 785210 | 784818 | spx | 4.03e-68 | essential gene which is a thiol/oxidative stress sensor | 80.15 | 100.00 | BAB57159 |
| HFKFMLOA_324 | 20607 | 20849 | SpoVG | 7.52e-39 | RNA-binding protein | 81.48 | 79.41 | AAT02994 |
| HFKFMLOA_291 | 357113 | 357310 | CspA | 1.88e-31 | cold shock protein | 90.91 | 100.00 | CAA62903 |