Genome ID:GCA_029350965.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1277.35

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
No hit found

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
DDCMJOMI_43388586389962tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline87.07100.00X08034

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
DDCMJOMI_43388586389956tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX86.2199.78WP_003242953.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
DDCMJOMI_53507383508253capB0.0CapsuleImmune modulation82.8073.60NP_391471
DDCMJOMI_53508462508911capC2.74e-114CapsuleImmune modulation83.5999.78NP_391470

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
DDCMJOMI_1252815427018tufA0.0elongation factor Tu86.8195.69AHM69299
DDCMJOMI_2243595228pdxS1.36e-152encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS84.8398.31ACE61268
DDCMJOMI_64486433485657CodY7.12e-125nutrient-responsive regulator81.08100.00ACJ80679
DDCMJOMI_93255038255430spxA16.45e-70redox-responsive transcription factor83.21100.00AAF21893
DDCMJOMI_738139881201CspA2.50e-31cold shock protein90.91100.00CAA62903
DDCMJOMI_933944139247CspB6.14e-27cold shock protein84.6198.48CAD00094
DDCMJOMI_738139881204CspR3.27e-26cold shock protein80.0098.48AAO82613
DDCMJOMI_104157083157955lipA (SAUSA300_0829)9.48e-163lipoic acid synthetase80.8295.41ABD22039