Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 1 | 4 | 4.24 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| FOOHINML_1 | 3767668 | 3769044 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 86.78 | 100.00 | X08034 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FOOHINML_1 | 3767668 | 3769038 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 86.87 | 99.78 | WP_003242953.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| FOOHINML_1 | 2892849 | 2894030 | capB | 0.0 | Capsule | Immune modulation | 82.29 | 99.66 | NP_391471 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FOOHINML_1 | 2284765 | 2283629 | tufA | 0.0 | elongation factor Tu | 86.54 | 95.69 | AHM69299 |
| FOOHINML_1 | 2399550 | 2398681 | pdxS | 7.32e-150 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 84.48 | 98.31 | ACE61268 |
| FOOHINML_1 | 834192 | 833416 | CodY | 4.55e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| FOOHINML_1 | 3253542 | 3254414 | lipA (SAUSA300_0829) | 1.24e-161 | lipoic acid synthetase | 80.82 | 95.41 | ABD22039 |