Genome ID:GCA_029536855.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 6 | 10 | 4 | 12.33 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CMLFMHIN_1 | 3859905 | 3862475 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.77 | 100.00 | AL009126.3 |
| CMLFMHIN_1 | 3384287 | 3384625 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| CMLFMHIN_1 | 3383970 | 3384287 | ykkD | ARO:3003064 | ykkD | 98.10 | 100.00 | AL009126.1 |
| CMLFMHIN_1 | 2442937 | 2444106 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| CMLFMHIN_1 | 291058 | 291651 | tmrB | ARO:3003059 | tmrB | 97.97 | 100.00 | AL009126.3 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| CMLFMHIN_1 | 350526 | 351429 | mph(K) | Spiramycin, Telithromycin | 96.74 | 98.15 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CMLFMHIN_1 | 350529 | 351110 | mphK | macrolide 2'-phosphotransferase MphK | PARTIALX | 97.94 | 63.40 | WP_003246254.1 |
| CMLFMHIN_1 | 33789 | 34883 | vmlR | ABC-F type ribosomal protection protein VmlR | PARTIALX | 95.90 | 66.91 | WP_003234144.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| CMLFMHIN_1 | 2660236 | 2660877 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.69 | 100.00 | NP_390062 |
| CMLFMHIN_1 | 1639494 | 1640432 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.68 | 100.00 | NP_391077 |
| CMLFMHIN_1 | 1172188 | 1173369 | capB | 0.0 | Capsule | Immune modulation | 99.58 | 100.00 | NP_391471 |
| CMLFMHIN_1 | 1635811 | 1636596 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.49 | 100.00 | NP_391080 |
| CMLFMHIN_1 | 2828885 | 2830648 | dep/capD | 0.0 | Capsule | Immune modulation | 99.15 | 100.00 | NP_389723 |
| CMLFMHIN_1 | 1636622 | 1637818 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.00 | 100.00 | NP_391079 |
| CMLFMHIN_1 | 1637847 | 1639466 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.95 | 100.00 | NP_391078 |
| CMLFMHIN_1 | 1173852 | 1174994 | capA | 0.0 | Capsule | Immune modulation | 98.86 | 100.00 | NP_391469 |
| CMLFMHIN_1 | 1640452 | 1647588 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.60 | 100.00 | NP_391076 |
| CMLFMHIN_1 | 1173384 | 1173833 | capC | 0.0 | Capsule | Immune modulation | 98.44 | 100.00 | NP_391470 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| CMLFMHIN_1 | 517229 | 516093 | tufA | 0.0 | elongation factor Tu | 84.70 | 95.69 | AHM69299 |
| CMLFMHIN_1 | 631273 | 630404 | pdxS | 3.65e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| CMLFMHIN_1 | 3067012 | 3066236 | CodY | 3.39e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| CMLFMHIN_1 | 1322363 | 1321794 | ClpP | 2.51e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |