Genome ID:GCA_029536935.2
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 11 | 10 | 4 | 15.39 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ELPIFMBE_1 | 2699941 | 2700795 | aadK | ARO:3002627 | aadK | 98.94 | 100.00 | AL009126.1 |
| ELPIFMBE_1 | 2682784 | 2683986 | blt | ARO:3003006 | blt | 99.25 | 100.00 | L32599.1 |
| ELPIFMBE_1 | 2441458 | 2442627 | bmr | ARO:3003007 | bmr | 99.49 | 100.00 | M33768.1 |
| ELPIFMBE_1 | 1477187 | 1477504 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| ELPIFMBE_1 | 1476849 | 1477187 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| ELPIFMBE_1 | 899221 | 901791 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.77 | 100.00 | AL009126.3 |
| ELPIFMBE_1 | 592289 | 593935 | vmlR | ARO:3004476 | vmlR | 99.45 | 100.18 | NC_000964.3 |
| ELPIFMBE_1 | 348912 | 349505 | tmrB | ARO:3003059 | tmrB | 98.98 | 100.00 | AL009126.3 |
| ELPIFMBE_1 | 298357 | 299790 | lmrB | ARO:3002813 | lmrB | 99.37 | 100.00 | JYFL01000006.1 |
| ELPIFMBE_1 | 285542 | 286462 | mphK | ARO:3004541 | mphK | 98.37 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| ELPIFMBE_1 | 2699941 | 2700795 | aadK | Streptomycin | 98.95 | 100.00 | M26879 |
| ELPIFMBE_1 | 285542 | 286462 | mph(K) | Spiramycin, Telithromycin | 97.83 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ELPIFMBE_1 | 592292 | 593935 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 99.45 | 100.00 | WP_003234144.1 |
| ELPIFMBE_1 | 2699944 | 2700795 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.94 | 100.00 | WP_003229862.1 |
| ELPIFMBE_1 | 285542 | 286459 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 98.37 | 100.00 | WP_003246254.1 |
| ELPIFMBE_1 | 4249085 | 4249603 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 93.64 | 100.00 | WP_003242546.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| ELPIFMBE_1 | 3255734 | 3256672 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.89 | 100.00 | NP_391077 |
| ELPIFMBE_1 | 3256700 | 3258319 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.81 | 100.00 | NP_391078 |
| ELPIFMBE_1 | 3758394 | 3759575 | capB | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | NP_391471 |
| ELPIFMBE_1 | 3259570 | 3260355 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.49 | 100.00 | NP_391080 |
| ELPIFMBE_1 | 3248578 | 3255714 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.38 | 100.00 | NP_391076 |
| ELPIFMBE_1 | 2244140 | 2244781 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.38 | 100.00 | NP_390062 |
| ELPIFMBE_1 | 3258348 | 3259544 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.00 | 100.00 | NP_391079 |
| ELPIFMBE_1 | 2067855 | 2069618 | dep/capD | 0.0 | Capsule | Immune modulation | 98.98 | 100.00 | NP_389723 |
| ELPIFMBE_1 | 3756769 | 3757911 | capA | 0.0 | Capsule | Immune modulation | 98.78 | 100.00 | NP_391469 |
| ELPIFMBE_1 | 3757930 | 3758379 | capC | 0.0 | Capsule | Immune modulation | 98.67 | 100.00 | NP_391470 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| ELPIFMBE_1 | 132417 | 133553 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| ELPIFMBE_1 | 18601 | 19470 | pdxS | 3.18e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| ELPIFMBE_1 | 1788622 | 1789398 | CodY | 3.47e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| ELPIFMBE_1 | 3597073 | 3597642 | ClpP | 2.57e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |