Genome ID:GCA_029537095.2
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 13 | 10 | 4 | 16.88 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KOIMJNAJ_1 | 2610069 | 2610923 | aadK | ARO:3002627 | aadK | 98.24 | 100.00 | AL009126.1 |
| KOIMJNAJ_1 | 2591400 | 2592602 | blt | ARO:3003006 | blt | 99.00 | 100.00 | L32599.1 |
| KOIMJNAJ_1 | 2364248 | 2365417 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| KOIMJNAJ_1 | 1387475 | 1387792 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| KOIMJNAJ_1 | 1387137 | 1387475 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| KOIMJNAJ_1 | 924683 | 927253 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.77 | 100.00 | AL009126.3 |
| KOIMJNAJ_1 | 633687 | 635333 | vmlR | ARO:3004476 | vmlR | 98.54 | 100.18 | NC_000964.3 |
| KOIMJNAJ_1 | 392557 | 393150 | tmrB | ARO:3003059 | tmrB | 100.00 | 100.00 | AL009126.3 |
| KOIMJNAJ_1 | 342082 | 343515 | lmrB | ARO:3002813 | lmrB | 99.58 | 100.00 | JYFL01000006.1 |
| KOIMJNAJ_1 | 329268 | 330188 | mphK | ARO:3004541 | mphK | 97.71 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| KOIMJNAJ_1 | 4071277 | 4072653 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 98.84 | 100.00 | X08034 |
| KOIMJNAJ_1 | 2610071 | 2610923 | aadK | Streptomycin | 98.71 | 99.77 | M26879 |
| KOIMJNAJ_1 | 329268 | 330188 | mph(K) | Spiramycin, Telithromycin | 97.72 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KOIMJNAJ_1 | 4071280 | 4072653 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 98.69 | 100.00 | WP_003242953.1 |
| KOIMJNAJ_1 | 633690 | 635333 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.54 | 100.00 | WP_003234144.1 |
| KOIMJNAJ_1 | 2610072 | 2610923 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.24 | 100.00 | WP_003229862.1 |
| KOIMJNAJ_1 | 329268 | 330185 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 97.71 | 100.00 | WP_003246254.1 |
| KOIMJNAJ_1 | 4068806 | 4069324 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 90.17 | 100.00 | WP_003242546.1 |
| KOIMJNAJ_1 | 2066659 | 2069256 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 80.60 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| KOIMJNAJ_1 | 3171065 | 3172003 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.68 | 100.00 | NP_391077 |
| KOIMJNAJ_1 | 3586444 | 3587625 | capB | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | NP_391471 |
| KOIMJNAJ_1 | 3172031 | 3173650 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.26 | 100.00 | NP_391078 |
| KOIMJNAJ_1 | 3174901 | 3175686 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.24 | 100.00 | NP_391080 |
| KOIMJNAJ_1 | 2162802 | 2163443 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.22 | 100.00 | NP_390062 |
| KOIMJNAJ_1 | 3584819 | 3585961 | capA | 0.0 | Capsule | Immune modulation | 98.95 | 100.00 | NP_391469 |
| KOIMJNAJ_1 | 3173679 | 3174875 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.91 | 100.00 | NP_391079 |
| KOIMJNAJ_1 | 2019717 | 2021480 | dep/capD | 0.0 | Capsule | Immune modulation | 98.87 | 100.00 | NP_389723 |
| KOIMJNAJ_1 | 3163910 | 3171045 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.81 | 99.99 | NP_391076 |
| KOIMJNAJ_1 | 3585980 | 3586429 | capC | 0.0 | Capsule | Immune modulation | 98.67 | 100.00 | NP_391470 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| KOIMJNAJ_1 | 132392 | 133528 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| KOIMJNAJ_1 | 18664 | 19533 | pdxS | 3.04e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| KOIMJNAJ_1 | 1697340 | 1698116 | CodY | 3.33e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| KOIMJNAJ_1 | 3437196 | 3437765 | ClpP | 2.47e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |