Genome ID:GCA_029537155.2
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 13 | 10 | 4 | 16.88 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PBEOOPMJ_1 | 2621336 | 2622190 | aadK | ARO:3002627 | aadK | 100.00 | 100.00 | AL009126.1 |
| PBEOOPMJ_1 | 2602627 | 2603829 | blt | ARO:3003006 | blt | 100.00 | 100.00 | L32599.1 |
| PBEOOPMJ_1 | 2380308 | 2381477 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| PBEOOPMJ_1 | 1355941 | 1356258 | ykkD | ARO:3003064 | ykkD | 100.00 | 100.00 | AL009126.1 |
| PBEOOPMJ_1 | 1355603 | 1355941 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| PBEOOPMJ_1 | 895859 | 898429 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 100.00 | 100.00 | AL009126.3 |
| PBEOOPMJ_1 | 583818 | 585461 | vmlR | ARO:3004476 | vmlR | 100.00 | 100.00 | NC_000964.3 |
| PBEOOPMJ_1 | 338753 | 339346 | tmrB | ARO:3003059 | tmrB | 100.00 | 100.00 | AL009126.3 |
| PBEOOPMJ_1 | 288250 | 289683 | lmrB | ARO:3002813 | lmrB | 100.00 | 100.00 | JYFL01000006.1 |
| PBEOOPMJ_1 | 275435 | 276355 | mphK | ARO:3004541 | mphK | 100.00 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| PBEOOPMJ_1 | 2621336 | 2622190 | aadK | Streptomycin | 100.00 | 100.00 | M26879 |
| PBEOOPMJ_1 | 275435 | 276355 | mph(K) | Spiramycin, Telithromycin | 100.00 | 100.00 | NC_000964 |
| PBEOOPMJ_1 | 4112180 | 4113556 | tet(L) | Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline | 100.00 | 100.00 | X08034 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PBEOOPMJ_1 | 2621339 | 2622190 | aadK | aminoglycoside 6-adenylyltransferase AadK | EXACTX | 100.00 | 100.00 | WP_003229862.1 |
| PBEOOPMJ_1 | 275435 | 276352 | mphK | macrolide 2'-phosphotransferase MphK | EXACTX | 100.00 | 100.00 | WP_003246254.1 |
| PBEOOPMJ_1 | 4109662 | 4110180 | satA | streptothricin N-acetyltransferase SatA | EXACTX | 100.00 | 100.00 | WP_003242546.1 |
| PBEOOPMJ_1 | 4112183 | 4113556 | tet(L) | tetracycline efflux MFS transporter Tet(L) | EXACTX | 100.00 | 100.00 | WP_003242953.1 |
| PBEOOPMJ_1 | 583821 | 585461 | vmlR | ABC-F type ribosomal protection protein VmlR | EXACTX | 100.00 | 100.00 | WP_003234144.1 |
| PBEOOPMJ_1 | 2071397 | 2073991 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 81.15 | 99.88 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| PBEOOPMJ_1 | 3622320 | 3623462 | capA | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391469 |
| PBEOOPMJ_1 | 3623945 | 3625126 | capB | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391471 |
| PBEOOPMJ_1 | 3623481 | 3623930 | capC | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391470 |
| PBEOOPMJ_1 | 2024739 | 2026502 | dep/capD | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_389723 |
| PBEOOPMJ_1 | 3215986 | 3216771 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391080 |
| PBEOOPMJ_1 | 3212150 | 3213088 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391077 |
| PBEOOPMJ_1 | 3214764 | 3215960 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391079 |
| PBEOOPMJ_1 | 3213116 | 3214735 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391078 |
| PBEOOPMJ_1 | 3204994 | 3212130 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391076 |
| PBEOOPMJ_1 | 2180963 | 2181604 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 100.00 | 100.00 | NP_390062 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| PBEOOPMJ_1 | 132471 | 133607 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| PBEOOPMJ_1 | 18665 | 19534 | pdxS | 3.08e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| PBEOOPMJ_1 | 1669205 | 1669981 | CodY | 3.36e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| PBEOOPMJ_1 | 3470709 | 3471278 | ClpP | 2.49e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |