Genome ID：GCA_029537415.2

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
13	10	4	16.88

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
GMMNEGEA_1	2735270	2736124	aadK	ARO:3002627	aadK	100.00	100.00	AL009126.1
GMMNEGEA_1	2716561	2717763	blt	ARO:3003006	blt	100.00	100.00	L32599.1
GMMNEGEA_1	2494243	2495412	bmr	ARO:3003007	bmr	99.74	100.00	M33768.1
GMMNEGEA_1	1376444	1376761	ykkD	ARO:3003064	ykkD	100.00	100.00	AL009126.1
GMMNEGEA_1	1376106	1376444	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
GMMNEGEA_1	916363	918933	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	100.00	100.00	AL009126.3
GMMNEGEA_1	604330	605973	vmlR	ARO:3004476	vmlR	100.00	100.00	NC_000964.3
GMMNEGEA_1	338754	339347	tmrB	ARO:3003059	tmrB	100.00	100.00	AL009126.3
GMMNEGEA_1	288252	289685	lmrB	ARO:3002813	lmrB	100.00	100.00	JYFL01000006.1
GMMNEGEA_1	275437	276357	mphK	ARO:3004541	mphK	100.00	100.00	CP010314.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
GMMNEGEA_1	2735270	2736124	aadK	Streptomycin	100.00	100.00	M26879
GMMNEGEA_1	275437	276357	mph(K)	Spiramycin, Telithromycin	100.00	100.00	NC_000964
GMMNEGEA_1	4187293	4188669	tet(L)	Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline	100.00	100.00	X08034

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
GMMNEGEA_1	2735273	2736124	aadK	aminoglycoside 6-adenylyltransferase AadK	EXACTX	100.00	100.00	WP_003229862.1
GMMNEGEA_1	275437	276354	mphK	macrolide 2'-phosphotransferase MphK	EXACTX	100.00	100.00	WP_003246254.1
GMMNEGEA_1	4184775	4185293	satA	streptothricin N-acetyltransferase SatA	EXACTX	100.00	100.00	WP_003242546.1
GMMNEGEA_1	4187296	4188669	tet(L)	tetracycline efflux MFS transporter Tet(L)	EXACTX	100.00	100.00	WP_003242953.1
GMMNEGEA_1	604333	605973	vmlR	ABC-F type ribosomal protection protein VmlR	EXACTX	100.00	100.00	WP_003234144.1
GMMNEGEA_1	2050929	2053523	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	81.15	99.88	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
GMMNEGEA_1	3697435	3698577	capA	0.0	Capsule	Immune modulation	100.00	100.00	NP_391469
GMMNEGEA_1	3699060	3700241	capB	0.0	Capsule	Immune modulation	100.00	100.00	NP_391471
GMMNEGEA_1	3698596	3699045	capC	0.0	Capsule	Immune modulation	100.00	100.00	NP_391470
GMMNEGEA_1	2004271	2006034	dep/capD	0.0	Capsule	Immune modulation	100.00	100.00	NP_389723
GMMNEGEA_1	3291099	3291884	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391080
GMMNEGEA_1	3287263	3288201	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391077
GMMNEGEA_1	3289877	3291073	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391079
GMMNEGEA_1	3288229	3289848	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391078
GMMNEGEA_1	3280107	3287243	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391076
GMMNEGEA_1	2294897	2295538	hlyIII	0.0	Hemolysin III	Exotoxin	100.00	100.00	NP_390062

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
GMMNEGEA_1	132473	133609	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
GMMNEGEA_1	18665	19534	pdxS	3.13e-149	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
GMMNEGEA_1	1689712	1690488	CodY	3.42e-124	nutrient-responsive regulator	81.08	100.00	ACJ80679
GMMNEGEA_1	3545823	3546392	ClpP	2.54e-98	part of proteolytic complex	81.05	97.44	BAB94595