Genome ID：GCA_029637165.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
13	10	4	16.88

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
LHHNJJHM_1	2683581	2684435	aadK	ARO:3002627	aadK	98.94	100.00	AL009126.1
LHHNJJHM_1	2666314	2667516	blt	ARO:3003006	blt	99.25	100.00	L32599.1
LHHNJJHM_1	2381228	2382397	bmr	ARO:3003007	bmr	99.49	100.00	M33768.1
LHHNJJHM_1	1395182	1395499	ykkD	ARO:3003064	ykkD	99.05	100.00	AL009126.1
LHHNJJHM_1	1394844	1395182	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
LHHNJJHM_1	933654	936224	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	99.77	100.00	AL009126.3
LHHNJJHM_1	582495	584123	vmlR	ARO:3004476	vmlR	99.08	99.09	NC_000964.3
LHHNJJHM_1	330098	330691	tmrB	ARO:3003059	tmrB	98.48	100.00	AL009126.3
LHHNJJHM_1	279573	281006	lmrB	ARO:3002813	lmrB	99.37	100.00	JYFL01000006.1
LHHNJJHM_1	266758	267624	mphK	ARO:3004541	mphK	98.61	94.12	CP010314.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
LHHNJJHM_1	4150761	4152137	tet(L)	Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline	99.06	100.00	D12567
LHHNJJHM_1	2683583	2684435	aadK	Streptomycin	98.94	99.77	M26879
LHHNJJHM_1	266758	267678	mph(K)	Spiramycin, Telithromycin	98.05	100.00	NC_000964

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
LHHNJJHM_1	582498	584123	vmlR	ABC-F type ribosomal protection protein VmlR	BLASTX	99.08	98.90	WP_003234144.1
LHHNJJHM_1	2683584	2684435	aadK	aminoglycoside 6-adenylyltransferase AadK	BLASTX	98.94	100.00	WP_003229862.1
LHHNJJHM_1	4150764	4152137	tet(L)	tetracycline efflux MFS transporter Tet(L)	BLASTX	98.91	100.00	WP_063856081.1
LHHNJJHM_1	266758	267675	mphK	macrolide 2'-phosphotransferase MphK	INTERNAL_STOP	98.04	100.00	WP_003246254.1
LHHNJJHM_1	4148298	4148816	satA	streptothricin N-acetyltransferase SatA	BLASTX	90.75	100.00	WP_003242546.1
LHHNJJHM_1	2075137	2077725	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	80.37	100.00	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
LHHNJJHM_1	3657370	3658512	capA	0.0	Capsule	Immune modulation	100.00	100.00	NP_391469
LHHNJJHM_1	3658531	3658980	capC	0.0	Capsule	Immune modulation	100.00	100.00	NP_391470
LHHNJJHM_1	3255580	3256365	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391080
LHHNJJHM_1	3244588	3251724	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	99.99	100.00	NP_391076
LHHNJJHM_1	3658995	3660176	capB	0.0	Capsule	Immune modulation	99.92	100.00	NP_391471
LHHNJJHM_1	3251744	3252682	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	99.89	100.00	NP_391077
LHHNJJHM_1	3252710	3254329	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	99.57	100.00	NP_391078
LHHNJJHM_1	3254358	3255554	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	99.50	100.00	NP_391079
LHHNJJHM_1	2178433	2179074	hlyIII	0.0	Hemolysin III	Exotoxin	99.38	100.00	NP_390062
LHHNJJHM_1	2020733	2022496	dep/capD	0.0	Capsule	Immune modulation	98.92	100.00	NP_389723

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
LHHNJJHM_1	132363	133499	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
LHHNJJHM_1	18660	19529	pdxS	3.10e-149	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
LHHNJJHM_1	1705184	1705960	CodY	3.39e-124	nutrient-responsive regulator	81.08	100.00	ACJ80679
LHHNJJHM_1	3504907	3505476	ClpP	2.51e-98	part of proteolytic complex	81.05	97.44	BAB94595