Genome ID:GCA_029762015.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 10 | 3 | 11.18 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FHEPCDHB_1 | 1378684 | 1379001 | ykkD | ARO:3003064 | ykkD | 97.14 | 100.00 | AL009126.1 |
| FHEPCDHB_1 | 1378346 | 1378684 | ykkC | ARO:3003063 | ykkC | 98.21 | 100.00 | AL009126.1 |
| FHEPCDHB_1 | 264456 | 265376 | mphK | ARO:3004541 | mphK | 96.41 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| FHEPCDHB_1 | 264456 | 265376 | mph(K) | Spiramycin, Telithromycin | 97.29 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FHEPCDHB_1 | 264456 | 265373 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 96.41 | 100.00 | WP_003246254.1 |
| FHEPCDHB_1 | 559619 | 561100 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 95.75 | 90.31 | WP_003234144.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| FHEPCDHB_1 | 3481755 | 3482936 | capB | 0.0 | Capsule | Immune modulation | 99.49 | 100.00 | NP_391471 |
| FHEPCDHB_1 | 2073949 | 2074590 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.38 | 100.00 | NP_390062 |
| FHEPCDHB_1 | 3072832 | 3073770 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.15 | 99.89 | NP_391077 |
| FHEPCDHB_1 | 3075449 | 3076645 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.91 | 100.00 | NP_391079 |
| FHEPCDHB_1 | 1908980 | 1910745 | dep/capD | 0.0 | Capsule | Immune modulation | 98.75 | 100.00 | NP_389723 |
| FHEPCDHB_1 | 3073798 | 3075420 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.71 | 100.00 | NP_391078 |
| FHEPCDHB_1 | 3076671 | 3077458 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.61 | 99.87 | NP_391080 |
| FHEPCDHB_1 | 3481292 | 3481740 | capC | 0.0 | Capsule | Immune modulation | 98.22 | 99.78 | NP_391470 |
| FHEPCDHB_1 | 3065670 | 3072813 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.56 | 99.97 | NP_391076 |
| FHEPCDHB_1 | 3480148 | 3481273 | capA | 0.0 | Capsule | Immune modulation | 96.77 | 99.83 | NP_391469 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FHEPCDHB_1 | 123661 | 124506 | tufA | 5.52e-167 | elongation factor Tu | 86.53 | 71.32 | AHM69299 |
| FHEPCDHB_1 | 9415 | 10062 | pdxS | 1.11e-128 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 86.11 | 73.22 | ACE61268 |
| FHEPCDHB_1 | 1705275 | 1706009 | CodY | 1.70e-117 | nutrient-responsive regulator | 82.04 | 94.59 | ACJ80679 |