Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 10 | 4 | 10.95 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| GCOMOKKJ_1 | 3318259 | 3319186 | mph(K) | Spiramycin, Telithromycin | 96.98 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GCOMOKKJ_1 | 2982670 | 2983041 | satA | streptothricin N-acetyltransferase SatA | PARTIALX | 90.32 | 71.68 | WP_003242546.1 |
| GCOMOKKJ_1 | 3318259 | 3319044 | mphK | macrolide 2'-phosphotransferase MphK | INTERNAL_STOP | 83.02 | 84.97 | WP_003246254.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| GCOMOKKJ_1 | 1074887 | 1075528 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.38 | 100.00 | NP_390062 |
| GCOMOKKJ_1 | 2510593 | 2511042 | capC | 0.0 | Capsule | Immune modulation | 99.11 | 100.00 | NP_391470 |
| GCOMOKKJ_1 | 2511057 | 2512241 | capB | 0.0 | Capsule | Immune modulation | 98.90 | 100.08 | NP_391471 |
| GCOMOKKJ_1 | 2098462 | 2099402 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.83 | 100.11 | NP_391077 |
| GCOMOKKJ_1 | 2509431 | 2510574 | capA | 0.0 | Capsule | Immune modulation | 98.60 | 100.00 | NP_391469 |
| GCOMOKKJ_1 | 922676 | 924443 | dep/capD | 0.0 | Capsule | Immune modulation | 98.30 | 100.06 | NP_389723 |
| GCOMOKKJ_1 | 2099430 | 2101057 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.28 | 100.25 | NP_391078 |
| GCOMOKKJ_1 | 2102302 | 2103090 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.23 | 99.87 | NP_391080 |
| GCOMOKKJ_1 | 2101075 | 2102276 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.17 | 100.08 | NP_391079 |
| GCOMOKKJ_1 | 2091286 | 2098442 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.17 | 100.04 | NP_391076 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| GCOMOKKJ_1 | 3036142 | 3037011 | pdxS | 2.95e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| GCOMOKKJ_1 | 722634 | 723410 | CodY | 3.22e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| GCOMOKKJ_1 | 2365215 | 2365697 | ClpP | 6.89e-84 | part of proteolytic complex | 83.85 | 82.56 | BAB94595 |
| GCOMOKKJ_1 | 263462 | 263854 | spxA1 | 2.53e-69 | redox-responsive transcription factor | 83.97 | 100.00 | AAF21893 |
| GCOMOKKJ_1 | 263462 | 263854 | spx | 1.51e-67 | essential gene which is a thiol/oxidative stress sensor | 80.15 | 100.00 | BAB57159 |