Genome ID:GCA_029762135.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 10 | 3 | 11.18 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MNJFOOMN_1 | 1355887 | 1356204 | ykkD | ARO:3003064 | ykkD | 97.14 | 100.00 | AL009126.1 |
| MNJFOOMN_1 | 1355549 | 1355887 | ykkC | ARO:3003063 | ykkC | 98.21 | 100.00 | AL009126.1 |
| MNJFOOMN_1 | 540618 | 542243 | vmlR | ARO:3004476 | vmlR | 95.56 | 98.90 | NC_000964.3 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| MNJFOOMN_1 | 245492 | 246414 | mph(K) | Spiramycin, Telithromycin | 97.18 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MNJFOOMN_1 | 540621 | 542243 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 95.56 | 98.90 | WP_003234144.1 |
| MNJFOOMN_1 | 245806 | 246411 | mphK | macrolide 2'-phosphotransferase MphK | PARTIALX | 96.04 | 66.01 | WP_003246254.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| MNJFOOMN_1 | 3499628 | 3500809 | capB | 0.0 | Capsule | Immune modulation | 99.49 | 100.00 | NP_391471 |
| MNJFOOMN_1 | 2052643 | 2053285 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.07 | 100.00 | NP_390062 |
| MNJFOOMN_1 | 3088952 | 3089889 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.04 | 99.79 | NP_391077 |
| MNJFOOMN_1 | 3091569 | 3092766 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.92 | 100.00 | NP_391079 |
| MNJFOOMN_1 | 1887615 | 1889380 | dep/capD | 0.0 | Capsule | Immune modulation | 98.75 | 100.00 | NP_389723 |
| MNJFOOMN_1 | 3092792 | 3093578 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.60 | 100.00 | NP_391080 |
| MNJFOOMN_1 | 3089917 | 3091540 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.58 | 100.12 | NP_391078 |
| MNJFOOMN_1 | 3499164 | 3499613 | capC | 0.0 | Capsule | Immune modulation | 98.44 | 100.00 | NP_391470 |
| MNJFOOMN_1 | 3081793 | 3088933 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.47 | 99.93 | NP_391076 |
| MNJFOOMN_1 | 3498021 | 3499145 | capA | 0.0 | Capsule | Immune modulation | 96.76 | 99.83 | NP_391469 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MNJFOOMN_1 | 104706 | 105551 | tufA | 9.81e-167 | elongation factor Tu | 85.82 | 71.32 | AHM69299 |
| MNJFOOMN_1 | 4032902 | 4033771 | pdxS | 2.39e-155 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 82.76 | 98.31 | ACE61268 |
| MNJFOOMN_1 | 1682458 | 1683234 | CodY | 6.56e-122 | nutrient-responsive regulator | 80.31 | 100.00 | ACJ80679 |