Genome ID:GCA_029762175.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 6 | 10 | 3 | 12.04 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BDDMGOKO_1 | 3536469 | 3536807 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| BDDMGOKO_1 | 3536152 | 3536469 | ykkD | ARO:3003064 | ykkD | 97.14 | 100.00 | AL009126.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BDDMGOKO_1 | 605932 | 606853 | mph(K) | Spiramycin, Telithromycin | 98.26 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BDDMGOKO_1 | 983677 | 984048 | satA | streptothricin N-acetyltransferase SatA | PARTIALX | 91.13 | 71.68 | WP_003242546.1 |
| BDDMGOKO_1 | 336808 | 338028 | vmlR | ABC-F type ribosomal protection protein VmlR | INTERNAL_STOP | 81.88 | 74.41 | WP_003234144.1 |
| BDDMGOKO_1 | 3004975 | 3007569 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 80.18 | 100.00 | WP_087347987.1 |
| BDDMGOKO_1 | 606263 | 606853 | mphK | macrolide 2'-phosphotransferase MphK | PARTIALX | 98.48 | 64.38 | WP_003246254.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| BDDMGOKO_1 | 2855193 | 2855835 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.53 | 100.00 | NP_390062 |
| BDDMGOKO_1 | 1906367 | 1907152 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.36 | 100.00 | NP_391080 |
| BDDMGOKO_1 | 1910039 | 1910979 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.36 | 100.00 | NP_391077 |
| BDDMGOKO_1 | 1452913 | 1454091 | capB | 0.0 | Capsule | Immune modulation | 99.32 | 99.83 | NP_391471 |
| BDDMGOKO_1 | 1454576 | 1455718 | capA | 0.0 | Capsule | Immune modulation | 99.21 | 100.00 | NP_391469 |
| BDDMGOKO_1 | 1907178 | 1908375 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.75 | 100.00 | NP_391079 |
| BDDMGOKO_1 | 2952568 | 2954331 | dep/capD | 0.0 | Capsule | Immune modulation | 98.75 | 99.94 | NP_389723 |
| BDDMGOKO_1 | 1454106 | 1454557 | capC | 0.0 | Capsule | Immune modulation | 98.67 | 100.22 | NP_391470 |
| BDDMGOKO_1 | 1910999 | 1918134 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.67 | 99.96 | NP_391076 |
| BDDMGOKO_1 | 1908393 | 1910011 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.58 | 99.94 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BDDMGOKO_1 | 932155 | 931286 | pdxS | 3.46e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| BDDMGOKO_1 | 3224170 | 3223394 | CodY | 3.21e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| BDDMGOKO_1 | 1611838 | 1611269 | ClpP | 2.38e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |