Genome ID:GCA_029762295.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 7 | 10 | 3 | 12.57 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FKFCNPJD_1 | 2552483 | 2553403 | mphK | ARO:3004541 | mphK | 98.37 | 100.00 | CP010314.1 |
| FKFCNPJD_1 | 1980102 | 1982672 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.42 | 100.00 | AL009126.3 |
| FKFCNPJD_1 | 1528106 | 1528444 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| FKFCNPJD_1 | 1527789 | 1528106 | ykkD | ARO:3003064 | ykkD | 98.10 | 100.00 | AL009126.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| FKFCNPJD_1 | 2552483 | 2553403 | mph(K) | Spiramycin, Telithromycin | 98.37 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FKFCNPJD_1 | 2552486 | 2553403 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 98.37 | 100.00 | WP_003246254.1 |
| FKFCNPJD_1 | 2930129 | 2930500 | satA | streptothricin N-acetyltransferase SatA | PARTIALX | 91.13 | 71.68 | WP_003242546.1 |
| FKFCNPJD_1 | 2283344 | 2284564 | vmlR | ABC-F type ribosomal protection protein VmlR | INTERNAL_STOP | 82.04 | 74.41 | WP_003234144.1 |
| FKFCNPJD_1 | 960478 | 963072 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 80.18 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| FKFCNPJD_1 | 847715 | 848357 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.53 | 100.00 | NP_390062 |
| FKFCNPJD_1 | 3852826 | 3853611 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.36 | 100.00 | NP_391080 |
| FKFCNPJD_1 | 3401033 | 3402175 | capA | 0.0 | Capsule | Immune modulation | 99.21 | 100.00 | NP_391469 |
| FKFCNPJD_1 | 3399368 | 3400548 | capB | 0.0 | Capsule | Immune modulation | 99.07 | 99.92 | NP_391471 |
| FKFCNPJD_1 | 3856501 | 3857439 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.94 | 99.89 | NP_391077 |
| FKFCNPJD_1 | 1012412 | 1014178 | dep/capD | 0.0 | Capsule | Immune modulation | 98.81 | 100.06 | NP_389723 |
| FKFCNPJD_1 | 3853637 | 3854834 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.66 | 100.00 | NP_391079 |
| FKFCNPJD_1 | 3857459 | 3864599 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.63 | 99.99 | NP_391076 |
| FKFCNPJD_1 | 3854852 | 3856473 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.46 | 100.00 | NP_391078 |
| FKFCNPJD_1 | 3400563 | 3401014 | capC | 0.0 | Capsule | Immune modulation | 98.45 | 100.22 | NP_391470 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FKFCNPJD_1 | 2878618 | 2877749 | pdxS | 2.94e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| FKFCNPJD_1 | 1215890 | 1215114 | CodY | 3.21e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| FKFCNPJD_1 | 3558292 | 3557723 | ClpP | 2.38e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |