Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 10 | 5 | 11.18 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| JJNANEPM_1 | 2820709 | 2821352 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.22 | 100.16 | NP_390062 |
| JJNANEPM_1 | 1218129 | 1218578 | capC | 0.0 | Capsule | Immune modulation | 99.11 | 100.00 | NP_391470 |
| JJNANEPM_1 | 1216931 | 1218114 | capB | 0.0 | Capsule | Immune modulation | 98.82 | 100.00 | NP_391471 |
| JJNANEPM_1 | 1733977 | 1734767 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.61 | 100.25 | NP_391080 |
| JJNANEPM_1 | 1737668 | 1738607 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.30 | 100.00 | NP_391077 |
| JJNANEPM_1 | 2991038 | 2992805 | dep/capD | 0.0 | Capsule | Immune modulation | 98.19 | 100.11 | NP_389723 |
| JJNANEPM_1 | 1734793 | 1735995 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.09 | 100.08 | NP_391079 |
| JJNANEPM_1 | 1218597 | 1219744 | capA | 0.0 | Capsule | Immune modulation | 98.08 | 100.09 | NP_391469 |
| JJNANEPM_1 | 1738627 | 1745781 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.93 | 100.06 | NP_391076 |
| JJNANEPM_1 | 1736013 | 1737640 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.54 | 100.19 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| JJNANEPM_1 | 639845 | 638976 | pdxS | 3.32e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| JJNANEPM_1 | 3342569 | 3341793 | CodY | 3.10e-123 | nutrient-responsive regulator | 80.69 | 100.00 | ACJ80679 |
| JJNANEPM_1 | 1375480 | 1374998 | ClpP | 7.76e-84 | part of proteolytic complex | 83.85 | 82.56 | BAB94595 |
| JJNANEPM_1 | 3828375 | 3827983 | spxA1 | 2.85e-69 | redox-responsive transcription factor | 83.97 | 100.00 | AAF21893 |
| JJNANEPM_1 | 3828375 | 3827983 | spx | 1.70e-67 | essential gene which is a thiol/oxidative stress sensor | 80.15 | 100.00 | BAB57159 |
| JJNANEPM_1 | 1690751 | 1691446 | lipA (SAUSA300_0829) | 1.40e-134 | lipoic acid synthetase | 81.03 | 76.07 | ABD22039 |