Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 10 | 4 | 10.95 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JPPEMCHJ_1 | 2824896 | 2825480 | tmrB | ARO:3003059 | tmrB | 96.77 | 98.48 | AL009126.3 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| JPPEMCHJ_1 | 2884320 | 2885240 | mph(K) | Spiramycin, Telithromycin | 96.42 | 99.78 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JPPEMCHJ_1 | 2548595 | 2549695 | vmlR | ABC-F type ribosomal protection protein VmlR | INTERNAL_STOP | 84.31 | 66.91 | WP_003234144.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| JPPEMCHJ_1 | 894693 | 895335 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.38 | 100.00 | NP_390062 |
| JPPEMCHJ_1 | 3746991 | 3748172 | capB | 0.0 | Capsule | Immune modulation | 99.24 | 100.00 | NP_391471 |
| JPPEMCHJ_1 | 1119194 | 1120959 | dep/capD | 0.0 | Capsule | Immune modulation | 98.98 | 100.06 | NP_389723 |
| JPPEMCHJ_1 | 4275471 | 4276258 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.86 | 100.13 | NP_391080 |
| JPPEMCHJ_1 | 4279161 | 4280100 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.62 | 99.89 | NP_391077 |
| JPPEMCHJ_1 | 3748657 | 3749799 | capA | 0.0 | Capsule | Immune modulation | 98.51 | 100.00 | NP_391469 |
| JPPEMCHJ_1 | 4277513 | 4279133 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.21 | 99.94 | NP_391078 |
| JPPEMCHJ_1 | 4280120 | 4287280 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.75 | 100.10 | NP_391076 |
| JPPEMCHJ_1 | 4276284 | 4277484 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.75 | 99.92 | NP_391079 |
| JPPEMCHJ_1 | 3748187 | 3748638 | capC | 0.0 | Capsule | Immune modulation | 97.57 | 100.22 | NP_391470 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| JPPEMCHJ_1 | 3078778 | 3077642 | tufA | 0.0 | elongation factor Tu | 84.70 | 95.69 | AHM69299 |
| JPPEMCHJ_1 | 3919965 | 3919396 | ClpP | 7.59e-98 | part of proteolytic complex | 80.53 | 97.44 | BAB94595 |
| JPPEMCHJ_1 | 1424226 | 1423612 | CodY | 3.10e-95 | nutrient-responsive regulator | 81.95 | 79.15 | ACJ80679 |
| JPPEMCHJ_1 | 1929495 | 1929103 | spxA1 | 2.80e-69 | redox-responsive transcription factor | 83.97 | 100.00 | AAF21893 |
| JPPEMCHJ_1 | 1929495 | 1929103 | spx | 1.67e-67 | essential gene which is a thiol/oxidative stress sensor | 80.15 | 100.00 | BAB57159 |
| JPPEMCHJ_1 | 3192620 | 3192069 | pdxS | 2.06e-117 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 80.98 | 62.37 | ACE61268 |