Genome ID:GCA_029857115.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
410612.33

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
NEJECHEI_2702093703718vmlRARO:3004476vmlR94.8298.90NC_000964.3
NEJECHEI_1111638111976ykkCARO:3003063ykkC100.00100.00AL009126.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
NEJECHEI_2971690972612mph(K)Spiramycin, Telithromycin97.72100.00NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
NEJECHEI_2702093703715vmlRABC-F type ribosomal protection protein VmlRBLASTX94.8298.90WP_003234144.1
NEJECHEI_212729851273356satAstreptothricin N-acetyltransferase SatAPARTIALX91.1371.68WP_003242546.1
NEJECHEI_2971904972455mphKmacrolide 2'-phosphotransferase MphKPARTIALX96.7460.13WP_003246254.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
NEJECHEI_7300516301699capB0.0CapsuleImmune modulation99.49100.00NP_391471
NEJECHEI_3660741661383hlyIII0.0Hemolysin IIIExotoxin99.07100.00NP_390062
NEJECHEI_7748144749083dhbB0.0BacillibactinNutritional/Metabolic factor98.94100.00NP_391077
NEJECHEI_5280935282700dep/capD0.0CapsuleImmune modulation98.92100.00NP_389723
NEJECHEI_7302183303325capA0.0CapsuleImmune modulation98.78100.00NP_391469
NEJECHEI_7301714302164capC0.0CapsuleImmune modulation98.67100.00NP_391470
NEJECHEI_7744461745249dhbA0.0BacillibactinNutritional/Metabolic factor98.6199.87NP_391080
NEJECHEI_7745275746471dhbC0.0BacillibactinNutritional/Metabolic factor98.25100.00NP_391079
NEJECHEI_7749103756244dhbF0.0BacillibactinNutritional/Metabolic factor97.9399.96NP_391076
NEJECHEI_7746489748116dhbE0.0BacillibactinNutritional/Metabolic factor97.67100.19NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
NEJECHEI_212213421220692pdxS5.46e-128encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS86.6473.56ACE61268
NEJECHEI_53581536591CodY2.38e-124nutrient-responsive regulator80.69100.00ACJ80679
NEJECHEI_2107397107005spxA16.57e-69redox-responsive transcription factor83.21100.00AAF21893
NEJECHEI_211844481184206SpoVG1.96e-37RNA-binding protein81.4879.41AAT02994
NEJECHEI_2726411726214CspA6.23e-31cold shock protein90.91100.00CAA62903
NEJECHEI_3649500649306CspD4.82e-28cold shock protein81.5498.48CAC99957
NEJECHEI_211128211112012tufA2.78e-164elongation factor Tu86.3068.27AHM69299