Genome ID:GCA_029857255.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 7 | 10 | 4 | 12.85 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DCIBGDOO_1 | 4071969 | 4072889 | mphK | ARO:3004541 | mphK | 97.71 | 100.00 | CP010314.1 |
| DCIBGDOO_1 | 4019585 | 4020178 | tmrB | ARO:3003059 | tmrB | 96.95 | 100.00 | AL009126.3 |
| DCIBGDOO_1 | 3741513 | 3743135 | vmlR | ARO:3004476 | vmlR | 95.75 | 98.72 | NC_000964.3 |
| DCIBGDOO_1 | 3393405 | 3395975 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.77 | 100.00 | AL009126.3 |
| DCIBGDOO_1 | 2916093 | 2916431 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| DCIBGDOO_1 | 2915776 | 2916093 | ykkD | ARO:3003064 | ykkD | 98.10 | 100.00 | AL009126.1 |
| DCIBGDOO_1 | 1789602 | 1790771 | bmr | ARO:3003007 | bmr | 98.97 | 100.00 | M33768.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| DCIBGDOO_1 | 4071969 | 4072889 | mph(K) | Spiramycin, Telithromycin | 97.94 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DCIBGDOO_1 | 4071972 | 4072889 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 97.71 | 100.00 | WP_003246254.1 |
| DCIBGDOO_1 | 3741513 | 3743132 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 95.75 | 98.90 | WP_003234144.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| DCIBGDOO_1 | 2062306 | 2062947 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.69 | 100.00 | NP_390062 |
| DCIBGDOO_1 | 1012820 | 1013605 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.62 | 100.00 | NP_391080 |
| DCIBGDOO_1 | 513218 | 514398 | capB | 0.0 | Capsule | Immune modulation | 99.49 | 99.92 | NP_391471 |
| DCIBGDOO_1 | 1016492 | 1017430 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.47 | 100.00 | NP_391077 |
| DCIBGDOO_1 | 1013631 | 1014827 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.17 | 100.00 | NP_391079 |
| DCIBGDOO_1 | 514413 | 514862 | capC | 0.0 | Capsule | Immune modulation | 99.11 | 100.00 | NP_391470 |
| DCIBGDOO_1 | 2280346 | 2282109 | dep/capD | 0.0 | Capsule | Immune modulation | 98.98 | 100.00 | NP_389723 |
| DCIBGDOO_1 | 514881 | 516023 | capA | 0.0 | Capsule | Immune modulation | 98.78 | 100.00 | NP_391469 |
| DCIBGDOO_1 | 1017450 | 1024586 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.66 | 100.00 | NP_391076 |
| DCIBGDOO_1 | 1014845 | 1016464 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.15 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DCIBGDOO_1 | 4240120 | 4238984 | tufA | 0.0 | elongation factor Tu | 84.70 | 95.69 | AHM69299 |
| DCIBGDOO_1 | 4354173 | 4353304 | pdxS | 3.27e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| DCIBGDOO_1 | 2590295 | 2589519 | CodY | 2.35e-123 | nutrient-responsive regulator | 80.69 | 100.00 | ACJ80679 |
| DCIBGDOO_1 | 675934 | 675365 | ClpP | 2.65e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |