Genome ID：GCA_029857415.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
13	10	5	17.15

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
NPCOODPO_2	2542647	2543567	mphK	ARO:3004541	mphK	98.02	100.00	CP010314.1
NPCOODPO_2	2529317	2530750	lmrB	ARO:3002813	lmrB	100.00	100.00	JYFL01000006.1
NPCOODPO_2	2479593	2480186	tmrB	ARO:3003059	tmrB	98.48	100.00	AL009126.3
NPCOODPO_2	2233539	2235182	vmlR	ARO:3004476	vmlR	98.35	100.00	NC_000964.3
NPCOODPO_2	1940387	1942957	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	99.88	100.00	AL009126.3
NPCOODPO_2	1457612	1457950	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
NPCOODPO_2	1457295	1457612	ykkD	ARO:3003064	ykkD	99.05	100.00	AL009126.1
NPCOODPO_2	333894	335063	bmr	ARO:3003007	bmr	99.49	100.00	M33768.1
NPCOODPO_2	162807	164009	blt	ARO:3003006	blt	99.50	100.00	L32599.1
NPCOODPO_2	145888	146742	aadK	ARO:3002627	aadK	98.94	100.00	AL009126.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
NPCOODPO_2	145888	146740	aadK	Streptomycin	98.94	99.77	M26879
NPCOODPO_2	2845618	2846994	tet(L)	Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline	98.91	100.00	D12567
NPCOODPO_2	2542647	2543567	mph(K)	Spiramycin, Telithromycin	97.61	99.89	NC_000964

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
NPCOODPO_2	145888	146739	aadK	aminoglycoside 6-adenylyltransferase AadK	BLASTX	98.94	100.00	WP_003229862.1
NPCOODPO_2	2845618	2846991	tet(L)	tetracycline efflux MFS transporter Tet(L)	BLASTX	98.91	100.00	WP_063856081.1
NPCOODPO_2	2233539	2235179	vmlR	ABC-F type ribosomal protection protein VmlR	BLASTX	98.35	100.00	WP_003234144.1
NPCOODPO_2	2542659	2543567	mphK	macrolide 2'-phosphotransferase MphK	BLASTX	98.02	99.02	WP_003246254.1
NPCOODPO_2	2848947	2849465	satA	streptothricin N-acetyltransferase SatA	BLASTX	90.17	100.00	WP_003242546.1
NPCOODPO_2	643474	646071	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	80.83	100.00	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
NPCOODPO_3	483896	484681	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391080
NPCOODPO_3	480060	480998	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	99.89	100.00	NP_391077
NPCOODPO_3	472904	480040	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	99.78	100.00	NP_391076
NPCOODPO_2	3330528	3331709	capB	0.0	Capsule	Immune modulation	99.75	100.00	NP_391471
NPCOODPO_3	481026	482645	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	99.57	100.00	NP_391078
NPCOODPO_2	3331724	3332173	capC	0.0	Capsule	Immune modulation	99.56	100.00	NP_391470
NPCOODPO_2	693690	695453	dep/capD	0.0	Capsule	Immune modulation	99.43	100.00	NP_389723
NPCOODPO_3	482674	483870	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	99.25	100.00	NP_391079
NPCOODPO_2	534389	535030	hlyIII	0.0	Hemolysin III	Exotoxin	99.22	100.00	NP_390062
NPCOODPO_2	3332192	3333334	capA	0.0	Capsule	Immune modulation	99.21	100.00	NP_391469

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
NPCOODPO_2	2684615	2683479	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
NPCOODPO_2	2798352	2797483	pdxS	4.82e-149	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.45	98.31	ACE61268
NPCOODPO_2	1144334	1143558	CodY	3.00e-124	nutrient-responsive regulator	81.08	100.00	ACJ80679
NPCOODPO_2	3490914	3490345	ClpP	2.23e-98	part of proteolytic complex	81.05	97.44	BAB94595
NPCOODPO_1	21945	21751	CspB	2.20e-28	cold shock protein	83.08	98.48	CAD00094