Genome ID:GCA_029872855.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 1 | 0 | 3.16 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GBDADMNG_20 | 35232 | 37178 | tet(Q) | ARO:3000191 | tet(Q) | 97.34 | 98.63 | Z21523.1 |
| GBDADMNG_20 | 29848 | 30648 | ErmF | ARO:3000498 | ErmF | 99.25 | 100.00 | M17124.1 |
| GBDADMNG_17 | 26065 | 26967 | cepA | ARO:3003559 | cepA | 99.67 | 100.00 | U05883.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| GBDADMNG_20 | 29848 | 30648 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.88 | 100.00 | M17808 |
| GBDADMNG_17 | 26065 | 26967 | cepA | Unknown Beta-lactam | 99.78 | 100.00 | FR688022 |
| GBDADMNG_20 | 35232 | 37144 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.16 | 99.33 | L33696 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GBDADMNG_17 | 26068 | 26967 | cepA | CepA family extended-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005816369.1 |
| GBDADMNG_20 | 29848 | 30645 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 99.62 | 100.00 | WP_002682030.1 |
| GBDADMNG_20 | 35232 | 37145 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 98.43 | 99.53 | WP_063856407.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| GBDADMNG_1 | 237934 | 239127 | bft-1 | 0.0 | BFT B. fragilis toxin, subtype 1 | Exotoxin | 100.00 | 100.00 | BAA77276 |
| GBDADMNG_1 | 237934 | 239127 | bft-2 | 0.0 | BFT B. fragilis toxin, subtype 2 | Exotoxin | 94.89 | 100.00 | BAA77277 |
| GBDADMNG_1 | 237934 | 239127 | bft-3 | 0.0 | BFT B. fragilis toxin, subtype 3 | Exotoxin | 94.47 | 100.00 | BAA77275 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||