Genome ID:GCA_030016255.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 11 | 10 | 8 | 16.88 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OBPICGPG_106 | 454867 | 455184 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| OBPICGPG_106 | 454529 | 454867 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| OBPICGPG_128 | 379246 | 380415 | bmr | ARO:3003007 | bmr | 99.49 | 100.00 | M33768.1 |
| OBPICGPG_139 | 346335 | 347255 | mphK | ARO:3004541 | mphK | 97.71 | 100.00 | CP010314.1 |
| OBPICGPG_139 | 333007 | 334440 | lmrB | ARO:3002813 | lmrB | 99.58 | 100.00 | JYFL01000006.1 |
| OBPICGPG_150 | 305331 | 307901 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.53 | 100.00 | AL009126.3 |
| OBPICGPG_139 | 283373 | 283966 | tmrB | ARO:3003059 | tmrB | 100.00 | 100.00 | AL009126.3 |
| OBPICGPG_128 | 152861 | 154063 | blt | ARO:3003006 | blt | 99.50 | 100.00 | L32599.1 |
| OBPICGPG_128 | 136116 | 136970 | aadK | ARO:3002627 | aadK | 98.59 | 100.00 | AL009126.1 |
| OBPICGPG_139 | 29109 | 30752 | vmlR | ARO:3004476 | vmlR | 99.09 | 100.00 | NC_000964.3 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| OBPICGPG_128 | 136116 | 136970 | aadK | Streptomycin | 98.83 | 100.00 | M26879 |
| OBPICGPG_139 | 346335 | 347255 | mph(K) | Spiramycin, Telithromycin | 97.72 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OBPICGPG_139 | 29109 | 30749 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 99.09 | 100.00 | WP_003234144.1 |
| OBPICGPG_128 | 136116 | 136967 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.59 | 100.00 | WP_003229862.1 |
| OBPICGPG_139 | 346338 | 347255 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 97.71 | 100.00 | WP_003246254.1 |
| OBPICGPG_117 | 40030 | 40548 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 94.80 | 100.00 | WP_003242546.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| OBPICGPG_128 | 593000 | 593641 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.69 | 100.00 | NP_390062 |
| OBPICGPG_117 | 531830 | 533011 | capB | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | NP_391471 |
| OBPICGPG_169 | 69008 | 69793 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.36 | 100.00 | NP_391080 |
| OBPICGPG_169 | 69819 | 71015 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.33 | 100.00 | NP_391079 |
| OBPICGPG_128 | 751515 | 753278 | dep/capD | 0.0 | Capsule | Immune modulation | 98.98 | 100.00 | NP_389723 |
| OBPICGPG_117 | 533494 | 534636 | capA | 0.0 | Capsule | Immune modulation | 98.69 | 100.00 | NP_391469 |
| OBPICGPG_117 | 533026 | 533475 | capC | 0.0 | Capsule | Immune modulation | 98.67 | 100.00 | NP_391470 |
| OBPICGPG_169 | 72691 | 73629 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.40 | 100.00 | NP_391077 |
| OBPICGPG_169 | 73649 | 80785 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.36 | 100.00 | NP_391076 |
| OBPICGPG_169 | 71044 | 72663 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.41 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OBPICGPG_10 | 28001 | 26865 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| OBPICGPG_43 | 11196 | 10327 | pdxS | 1.11e-151 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| OBPICGPG_106 | 763636 | 764412 | CodY | 7.82e-125 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| OBPICGPG_117 | 691628 | 691059 | ClpP | 5.45e-99 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| OBPICGPG_106 | 277309 | 277701 | spxA1 | 6.15e-70 | redox-responsive transcription factor | 83.97 | 100.00 | AAF21893 |
| OBPICGPG_106 | 277309 | 277701 | spx | 3.67e-68 | essential gene which is a thiol/oxidative stress sensor | 80.15 | 100.00 | BAB57159 |
| OBPICGPG_21 | 34657 | 34415 | SpoVG | 7.50e-39 | RNA-binding protein | 81.48 | 79.41 | AAT02994 |
| OBPICGPG_139 | 74545 | 74348 | CspA | 1.65e-31 | cold shock protein | 90.91 | 100.00 | CAA62903 |
| OBPICGPG_128 | 581768 | 581574 | CspD | 1.96e-27 | cold shock protein | 80.00 | 98.48 | CAC99957 |
| OBPICGPG_128 | 581768 | 581571 | CspB | 4.06e-27 | cold shock protein | 80.30 | 100.00 | CAD00094 |