Genome ID:GCA_030016335.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 12 | 10 | 7 | 17.12 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MKMNKICO_96 | 607943 | 608797 | aadK | ARO:3002627 | aadK | 97.54 | 100.00 | AL009126.1 |
| MKMNKICO_96 | 588770 | 589972 | blt | ARO:3003006 | blt | 99.75 | 100.00 | L32599.1 |
| MKMNKICO_106 | 467600 | 467917 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| MKMNKICO_106 | 467262 | 467600 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| MKMNKICO_96 | 362134 | 363303 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| MKMNKICO_114 | 347152 | 348072 | mphK | ARO:3004541 | mphK | 97.71 | 100.00 | CP010314.1 |
| MKMNKICO_114 | 333823 | 335256 | lmrB | ARO:3002813 | lmrB | 99.37 | 100.00 | JYFL01000006.1 |
| MKMNKICO_114 | 28964 | 30607 | vmlR | ARO:3004476 | vmlR | 98.35 | 100.00 | NC_000964.3 |
| MKMNKICO_124 | 27368 | 29938 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.88 | 100.00 | AL009126.3 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| MKMNKICO_85 | 34598 | 35974 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 100.00 | 100.00 | X08034 |
| MKMNKICO_96 | 607945 | 608797 | aadK | Streptomycin | 98.48 | 99.77 | M26879 |
| MKMNKICO_114 | 347152 | 348072 | mph(K) | Spiramycin, Telithromycin | 97.50 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MKMNKICO_85 | 34598 | 35971 | tet(L) | tetracycline efflux MFS transporter Tet(L) | EXACTX | 100.00 | 100.00 | WP_003242953.1 |
| MKMNKICO_114 | 28964 | 30604 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.35 | 100.00 | WP_003234144.1 |
| MKMNKICO_114 | 347155 | 348072 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 97.71 | 100.00 | WP_003246254.1 |
| MKMNKICO_96 | 607946 | 608797 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 97.54 | 100.00 | WP_003229862.1 |
| MKMNKICO_85 | 37973 | 38491 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 89.60 | 100.00 | WP_003242546.1 |
| MKMNKICO_96 | 58378 | 60975 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 81.40 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| MKMNKICO_96 | 162946 | 163587 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 100.00 | 100.00 | NP_390062 |
| MKMNKICO_85 | 528142 | 529323 | capB | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | NP_391471 |
| MKMNKICO_96 | 8353 | 10116 | dep/capD | 0.0 | Capsule | Immune modulation | 99.49 | 100.00 | NP_389723 |
| MKMNKICO_85 | 943057 | 943842 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.36 | 100.00 | NP_391080 |
| MKMNKICO_85 | 946740 | 947678 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.36 | 100.00 | NP_391077 |
| MKMNKICO_85 | 943868 | 945064 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.17 | 100.00 | NP_391079 |
| MKMNKICO_85 | 947698 | 954832 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.06 | 99.97 | NP_391076 |
| MKMNKICO_85 | 529806 | 530948 | capA | 0.0 | Capsule | Immune modulation | 98.95 | 100.00 | NP_391469 |
| MKMNKICO_85 | 529338 | 529787 | capC | 0.0 | Capsule | Immune modulation | 98.67 | 100.00 | NP_391470 |
| MKMNKICO_85 | 945093 | 946712 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.52 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MKMNKICO_155 | 31715 | 32851 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| MKMNKICO_11 | 11246 | 10377 | pdxS | 1.11e-151 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| MKMNKICO_106 | 777497 | 778273 | CodY | 7.97e-125 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| MKMNKICO_85 | 690676 | 690107 | ClpP | 6.35e-99 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| MKMNKICO_106 | 276357 | 276749 | spxA1 | 6.26e-70 | redox-responsive transcription factor | 83.97 | 100.00 | AAF21893 |
| MKMNKICO_106 | 276357 | 276749 | spx | 3.74e-68 | essential gene which is a thiol/oxidative stress sensor | 80.15 | 100.00 | BAB57159 |
| MKMNKICO_166 | 20577 | 20819 | SpoVG | 7.51e-39 | RNA-binding protein | 81.48 | 79.41 | AAT02994 |
| MKMNKICO_114 | 81419 | 81222 | CspA | 1.93e-31 | cold shock protein | 90.91 | 100.00 | CAA62903 |