Genome ID：GCA_030016565.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
13	10	7	17.83

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
LICEPPGM_21	740357	741211	aadK	ARO:3002627	aadK	97.54	100.00	AL009126.1
LICEPPGM_21	721180	722382	blt	ARO:3003006	blt	100.00	100.00	L32599.1
LICEPPGM_41	516064	516402	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
LICEPPGM_41	515747	516064	ykkD	ARO:3003064	ykkD	99.05	100.00	AL009126.1
LICEPPGM_21	491673	492842	bmr	ARO:3003007	bmr	99.23	100.00	M33768.1
LICEPPGM_52	415961	417604	vmlR	ARO:3004476	vmlR	98.17	100.00	NC_000964.3
LICEPPGM_52	161716	162309	tmrB	ARO:3003059	tmrB	98.48	100.00	AL009126.3
LICEPPGM_52	111157	112590	lmrB	ARO:3002813	lmrB	99.37	100.00	JYFL01000006.1
LICEPPGM_52	98341	99261	mphK	ARO:3004541	mphK	99.02	100.00	CP010314.1
LICEPPGM_61	27368	29938	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	99.88	100.00	AL009126.3

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
LICEPPGM_32	34596	35972	tet(L)	Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline	100.00	100.00	X08034
LICEPPGM_21	740359	741211	aadK	Streptomycin	98.48	99.77	M26879
LICEPPGM_52	98341	99261	mph(K)	Spiramycin, Telithromycin	98.05	100.00	NC_000964

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
LICEPPGM_32	34596	35969	tet(L)	tetracycline efflux MFS transporter Tet(L)	EXACTX	100.00	100.00	WP_003242953.1
LICEPPGM_52	98341	99258	mphK	macrolide 2'-phosphotransferase MphK	BLASTX	99.02	100.00	WP_003246254.1
LICEPPGM_52	415964	417604	vmlR	ABC-F type ribosomal protection protein VmlR	BLASTX	98.17	100.00	WP_003234144.1
LICEPPGM_21	740360	741211	aadK	aminoglycoside 6-adenylyltransferase AadK	BLASTX	97.54	100.00	WP_003229862.1
LICEPPGM_32	37971	38489	satA	streptothricin N-acetyltransferase SatA	BLASTX	89.60	100.00	WP_003242546.1
LICEPPGM_21	58429	61026	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	81.06	100.00	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
LICEPPGM_21	292505	293146	hlyIII	0.0	Hemolysin III	Exotoxin	100.00	100.00	NP_390062
LICEPPGM_32	519279	520460	capB	0.0	Capsule	Immune modulation	99.66	100.00	NP_391471
LICEPPGM_32	933976	934761	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	99.36	100.00	NP_391080
LICEPPGM_32	937659	938597	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	99.36	100.00	NP_391077
LICEPPGM_32	934787	935983	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	99.17	100.00	NP_391079
LICEPPGM_21	8352	10115	dep/capD	0.0	Capsule	Immune modulation	99.15	100.00	NP_389723
LICEPPGM_32	938617	945753	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	99.00	100.00	NP_391076
LICEPPGM_32	520943	522085	capA	0.0	Capsule	Immune modulation	98.95	100.00	NP_391469
LICEPPGM_32	520475	520924	capC	0.0	Capsule	Immune modulation	98.67	100.00	NP_391470
LICEPPGM_32	936012	937631	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	98.52	100.00	NP_391078

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
LICEPPGM_92	27998	26862	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
LICEPPGM_11	11246	10377	pdxS	1.11e-151	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
LICEPPGM_41	206172	205396	CodY	7.66e-125	nutrient-responsive regulator	81.08	100.00	ACJ80679
LICEPPGM_32	681816	681247	ClpP	6.30e-99	part of proteolytic complex	81.05	97.44	BAB94595
LICEPPGM_41	668687	668295	spxA1	6.02e-70	redox-responsive transcription factor	83.97	100.00	AAF21893
LICEPPGM_41	668687	668295	spx	3.59e-68	essential gene which is a thiol/oxidative stress sensor	80.15	100.00	BAB57159
LICEPPGM_103	34708	34466	SpoVG	7.51e-39	RNA-binding protein	81.48	79.41	AAT02994
LICEPPGM_52	365154	365351	CspA	1.93e-31	cold shock protein	90.91	100.00	CAA62903