Genome ID：GCA_030016605.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
13	10	7	17.83

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
HCNLPJCL_56	1690973	1691827	aadK	ARO:3002627	aadK	100.00	100.00	AL009126.1
HCNLPJCL_56	1672268	1673470	blt	ARO:3003006	blt	100.00	100.00	L32599.1
HCNLPJCL_56	1449949	1451118	bmr	ARO:3003007	bmr	99.74	100.00	M33768.1
HCNLPJCL_56	425602	425919	ykkD	ARO:3003064	ykkD	100.00	100.00	AL009126.1
HCNLPJCL_56	425264	425602	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
HCNLPJCL_77	337917	338837	mphK	ARO:3004541	mphK	100.00	100.00	CP010314.1
HCNLPJCL_77	324583	326022	lmrB	ARO:3002813	lmrB	99.79	100.42	JYFL01000006.1
HCNLPJCL_87	278462	281032	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	100.00	100.00	AL009126.3
HCNLPJCL_77	274926	275519	tmrB	ARO:3003059	tmrB	100.00	100.00	AL009126.3
HCNLPJCL_77	28809	30452	vmlR	ARO:3004476	vmlR	100.00	100.00	NC_000964.3

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
HCNLPJCL_56	1690973	1691827	aadK	Streptomycin	100.00	100.00	M26879
HCNLPJCL_77	337917	338837	mph(K)	Spiramycin, Telithromycin	100.00	100.00	NC_000964
HCNLPJCL_98	36348	37724	tet(L)	Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline	100.00	100.00	X08034

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
HCNLPJCL_56	1690976	1691827	aadK	aminoglycoside 6-adenylyltransferase AadK	EXACTX	100.00	100.00	WP_003229862.1
HCNLPJCL_77	337920	338837	mphK	macrolide 2'-phosphotransferase MphK	EXACTX	100.00	100.00	WP_003246254.1
HCNLPJCL_98	39724	40242	satA	streptothricin N-acetyltransferase SatA	EXACTX	100.00	100.00	WP_003242546.1
HCNLPJCL_98	36348	37721	tet(L)	tetracycline efflux MFS transporter Tet(L)	EXACTX	100.00	100.00	WP_003242953.1
HCNLPJCL_77	28809	30449	vmlR	ABC-F type ribosomal protection protein VmlR	EXACTX	100.00	100.00	WP_003234144.1
HCNLPJCL_56	1141036	1143630	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	81.15	99.88	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
HCNLPJCL_67	398306	399448	capA	0.0	Capsule	Immune modulation	100.00	100.00	NP_391469
HCNLPJCL_67	396642	397823	capB	0.0	Capsule	Immune modulation	100.00	100.00	NP_391471
HCNLPJCL_67	397838	398287	capC	0.0	Capsule	Immune modulation	100.00	100.00	NP_391470
HCNLPJCL_56	1094378	1096141	dep/capD	0.0	Capsule	Immune modulation	100.00	100.00	NP_389723
HCNLPJCL_67	804998	805783	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391080
HCNLPJCL_56	1250603	1251244	hlyIII	0.0	Hemolysin III	Exotoxin	100.00	100.00	NP_390062
HCNLPJCL_67	809639	816775	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	99.99	100.00	NP_391076
HCNLPJCL_67	808681	809619	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	99.89	100.00	NP_391077
HCNLPJCL_67	805809	807005	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	99.67	100.00	NP_391079
HCNLPJCL_67	807034	808653	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	99.57	100.00	NP_391078

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
HCNLPJCL_109	31733	32869	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
HCNLPJCL_131	11259	10390	pdxS	1.11e-151	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
HCNLPJCL_56	738866	739642	CodY	1.73e-124	nutrient-responsive regulator	81.08	100.00	ACJ80679
HCNLPJCL_67	551060	550491	ClpP	5.52e-99	part of proteolytic complex	81.05	97.44	BAB94595
HCNLPJCL_56	276441	276833	spxA1	5.12e-69	redox-responsive transcription factor	83.21	100.00	AAF21893
HCNLPJCL_120	20575	20817	SpoVG	7.51e-39	RNA-binding protein	81.48	79.41	AAT02994
HCNLPJCL_77	75923	75726	CspA	1.89e-31	cold shock protein	90.91	100.00	CAA62903