Genome ID:GCA_030063805.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1266.40

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
HMEJNAOA_106031061359clbAARO:3002814clbA100.00100.00CP006845.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
HMEJNAOA_106032461359cfr(B)Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin89.0098.67KR610408

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
HMEJNAOA_106031361359clbA23S rRNA (adenine(2503)-C(8))-methyltransferase ClbAEXACTX100.00100.00WP_012116915.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
HMEJNAOA_9803095804276capB0.0CapsuleImmune modulation81.9699.66NP_391471
HMEJNAOA_9804291804740capC1.04e-115CapsuleImmune modulation83.8199.78NP_391470

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
HMEJNAOA_142809526959tufA0.0elongation factor Tu86.8195.69AHM69299
HMEJNAOA_161250611637pdxS1.36e-152encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS84.8398.31ACE61268
HMEJNAOA_1796754795978CodY1.80e-124nutrient-responsive regulator81.08100.00ACJ80679
HMEJNAOA_112737351273343spxA13.29e-69redox-responsive transcription factor83.21100.00AAF21893
HMEJNAOA_108373783540CspA2.48e-31cold shock protein90.91100.00CAA62903
HMEJNAOA_108373783543CspR3.25e-26cold shock protein80.0098.48AAO82613
HMEJNAOA_911662671167139lipA (SAUSA300_0829)4.19e-162lipoic acid synthetase80.8295.41ABD22039