Genome ID:GCA_030121685.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1310717.83

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
HGOMGNOE_114969681497285ykkDARO:3003064ykkD99.05100.00AL009126.1
HGOMGNOE_114966301496968ykkCARO:3003063ykkC100.00100.00AL009126.1
HGOMGNOE_12544778545632aadKARO:3002627aadK98.24100.00AL009126.1
HGOMGNOE_12526025527227bltARO:3003006blt99.00100.00L32599.1
HGOMGNOE_12352758353927bmrARO:3003007bmr99.74100.00M33768.1
HGOMGNOE_23265981268551Bacillus subtilis mprFARO:3003324Bsub_mprF99.77100.00AL009126.3
HGOMGNOE_31109850110770mphKARO:3004541mphK98.68100.00CP010314.1
HGOMGNOE_319651897957lmrBARO:3002813lmrB99.37100.42JYFL01000006.1
HGOMGNOE_314680647399tmrBARO:3003059tmrB98.48100.00AL009126.3
HGOMGNOE_302906230708vmlRARO:3004476vmlR99.45100.18NC_000964.3

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
HGOMGNOE_13446235838tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline99.27100.00D12567
HGOMGNOE_12544780545632aadKStreptomycin99.1899.77M26879
HGOMGNOE_31109850110770mph(K)Spiramycin, Telithromycin99.13100.00NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
HGOMGNOE_302906230705vmlRABC-F type ribosomal protection protein VmlRBLASTX99.45100.00WP_003234144.1
HGOMGNOE_13446235835tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX98.91100.00WP_063856081.1
HGOMGNOE_31109862110770mphKmacrolide 2'-phosphotransferase MphKBLASTX98.6899.02WP_003246254.1
HGOMGNOE_12544781545632aadKaminoglycoside 6-adenylyltransferase AadKBLASTX98.24100.00WP_003229862.1
HGOMGNOE_13783038348satAstreptothricin N-acetyltransferase SatABLASTX91.91100.00WP_003242546.1
HGOMGNOE_125886361460rphCrifamycin-inactivating phosphotransferase RphCBLASTX80.71100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
HGOMGNOE_12155438156079hlyIII0.0Hemolysin IIIExotoxin99.69100.00NP_390062
HGOMGNOE_1527858529039capB0.0CapsuleImmune modulation99.66100.00NP_391471
HGOMGNOE_1942685943470dhbA0.0BacillibactinNutritional/Metabolic factor99.49100.00NP_391080
HGOMGNOE_1529054529503capC0.0CapsuleImmune modulation99.33100.00NP_391470
HGOMGNOE_1946368947306dhbB0.0BacillibactinNutritional/Metabolic factor99.25100.00NP_391077
HGOMGNOE_12827010033dep/capD0.0CapsuleImmune modulation99.15100.00NP_389723
HGOMGNOE_1943496944692dhbC0.0BacillibactinNutritional/Metabolic factor99.00100.00NP_391079
HGOMGNOE_1529522530664capA0.0CapsuleImmune modulation98.95100.00NP_391469
HGOMGNOE_1947326954459dhbF0.0BacillibactinNutritional/Metabolic factor98.5499.99NP_391076
HGOMGNOE_1944721946340dhbE0.0BacillibactinNutritional/Metabolic factor97.16100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
HGOMGNOE_333163832774tufA0.0elongation factor Tu84.9695.69AHM69299
HGOMGNOE_242645133pdxS1.10e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
HGOMGNOE_118380581838834CodY1.65e-124nutrient-responsive regulator81.08100.00ACJ80679
HGOMGNOE_1671589671020ClpP1.22e-98part of proteolytic complex81.0597.44BAB94595
HGOMGNOE_113365151336907spxA11.29e-69redox-responsive transcription factor83.97100.00AAF21893
HGOMGNOE_113365151336907spx7.72e-68essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
HGOMGNOE_342047920721SpoVG7.48e-39RNA-binding protein81.4879.41AAT02994
HGOMGNOE_308446684269CspA9.99e-32cold shock protein90.91100.00CAA62903