Genome ID：GCA_030123085.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
13	10	4	16.88

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
HCIMJFIJ_1	2574255	2575109	aadK	ARO:3002627	aadK	98.59	100.00	AL009126.1
HCIMJFIJ_1	2557186	2558388	blt	ARO:3003006	blt	99.00	100.00	L32599.1
HCIMJFIJ_1	2383926	2385095	bmr	ARO:3003007	bmr	99.74	100.00	M33768.1
HCIMJFIJ_1	1345180	1345497	ykkD	ARO:3003064	ykkD	99.05	100.00	AL009126.1
HCIMJFIJ_1	1344842	1345180	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
HCIMJFIJ_1	883560	886130	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	99.53	100.00	AL009126.3
HCIMJFIJ_1	584931	586574	vmlR	ARO:3004476	vmlR	98.35	100.00	NC_000964.3
HCIMJFIJ_1	333038	333631	tmrB	ARO:3003059	tmrB	98.48	100.00	AL009126.3
HCIMJFIJ_1	321434	322084	Streptococcus suis chloramphenicol acetyltransferase	ARO:3004455	Ssui_ACT_CHL	94.91	100.00	AB080798.1
HCIMJFIJ_1	280173	281606	lmrB	ARO:3002813	lmrB	99.58	100.00	JYFL01000006.1
HCIMJFIJ_1	267360	268280	mphK	ARO:3004541	mphK	99.02	100.00	CP010314.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
HCIMJFIJ_1	321434	322084	cat(pC194)	Chloramphenicol	100.00	100.00	NC_002013
HCIMJFIJ_1	267360	268280	mph(K)	Spiramycin, Telithromycin	99.35	100.00	NC_000964
HCIMJFIJ_1	2574255	2575109	aadK	Streptomycin	98.71	100.00	M26879

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
HCIMJFIJ_1	321434	322081	catA	type A-9 chloramphenicol O-acetyltransferase	EXACTX	100.00	100.00	WP_001010387.1
HCIMJFIJ_1	267360	268277	mphK	macrolide 2'-phosphotransferase MphK	BLASTX	99.02	100.00	WP_003246254.1
HCIMJFIJ_1	2574258	2575109	aadK	aminoglycoside 6-adenylyltransferase AadK	BLASTX	98.59	100.00	WP_003229862.1
HCIMJFIJ_1	584934	586574	vmlR	ABC-F type ribosomal protection protein VmlR	BLASTX	98.35	100.00	WP_003234144.1
HCIMJFIJ_1	4056541	4057059	satA	streptothricin N-acetyltransferase SatA	BLASTX	94.22	100.00	WP_003242546.1
HCIMJFIJ_1	2032794	2035391	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	80.65	100.00	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
HCIMJFIJ_1	3556745	3557926	capB	0.0	Capsule	Immune modulation	99.75	100.00	NP_391471
HCIMJFIJ_1	3133899	3134684	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	99.75	100.00	NP_391080
HCIMJFIJ_1	2130990	2131631	hlyIII	0.0	Hemolysin III	Exotoxin	99.69	100.00	NP_390062
HCIMJFIJ_1	3132677	3133873	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	99.33	100.00	NP_391079
HCIMJFIJ_1	1978550	1980313	dep/capD	0.0	Capsule	Immune modulation	99.32	100.00	NP_389723
HCIMJFIJ_1	3556281	3556730	capC	0.0	Capsule	Immune modulation	99.11	100.00	NP_391470
HCIMJFIJ_1	3555120	3556262	capA	0.0	Capsule	Immune modulation	98.78	100.00	NP_391469
HCIMJFIJ_1	3122907	3130043	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	98.74	100.00	NP_391076
HCIMJFIJ_1	3130063	3131001	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	98.40	100.00	NP_391077
HCIMJFIJ_1	3131029	3132648	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	97.41	100.00	NP_391078

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
HCIMJFIJ_1	132417	133553	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
HCIMJFIJ_1	18602	19471	pdxS	3.03e-149	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
HCIMJFIJ_1	1656611	1657387	CodY	3.31e-124	nutrient-responsive regulator	81.08	100.00	ACJ80679
HCIMJFIJ_1	3397490	3398059	ClpP	2.46e-98	part of proteolytic complex	81.05	97.44	BAB94595