Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 2 | 7 | 7.55 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MCLBJMLG_5 | 56130 | 57179 | clbA | ARO:3002814 | clbA | 99.43 | 100.00 | CP006845.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| MCLBJMLG_5 | 56144 | 57179 | cfr(B) | Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin | 88.80 | 98.67 | KR610408 |
| MCLBJMLG_55 | 133090 | 134466 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 86.78 | 100.00 | X08034 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MCLBJMLG_5 | 56133 | 57179 | clbA | 23S rRNA (adenine(2503)-C(8))-methyltransferase ClbA | BLASTX | 99.43 | 100.00 | WP_012116915.1 |
| MCLBJMLG_55 | 133090 | 134460 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 86.65 | 99.78 | WP_003242953.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| MCLBJMLG_4 | 19834 | 21015 | capB | 0.0 | Capsule | Immune modulation | 81.87 | 99.66 | NP_391471 |
| MCLBJMLG_4 | 21030 | 21479 | capC | 3.72e-115 | Capsule | Immune modulation | 83.59 | 99.78 | NP_391470 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MCLBJMLG_7 | 31826 | 32962 | tufA | 0.0 | elongation factor Tu | 86.81 | 95.69 | AHM69299 |
| MCLBJMLG_13 | 4458 | 5327 | pdxS | 1.36e-152 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 84.83 | 98.31 | ACE61268 |
| MCLBJMLG_22 | 160099 | 160875 | CodY | 5.99e-125 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| MCLBJMLG_11 | 252865 | 253257 | spxA1 | 1.37e-69 | redox-responsive transcription factor | 83.21 | 100.00 | AAF21893 |
| MCLBJMLG_5 | 70759 | 70562 | CspA | 4.69e-32 | cold shock protein | 90.91 | 100.00 | CAA62903 |
| MCLBJMLG_64 | 183911 | 184105 | CspD | 8.13e-28 | cold shock protein | 80.00 | 98.48 | CAC99957 |
| MCLBJMLG_64 | 183911 | 184108 | CspB | 1.69e-27 | cold shock protein | 80.30 | 100.00 | CAD00094 |
| MCLBJMLG_5 | 70759 | 70565 | CspR | 6.15e-27 | cold shock protein | 80.00 | 98.48 | AAO82613 |
| MCLBJMLG_1 | 1340 | 2212 | lipA (SAUSA300_0829) | 5.21e-163 | lipoic acid synthetase | 80.82 | 95.41 | ABD22039 |