Genome ID:GCA_030348565.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 14 | 10 | 4 | 17.66 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IGBBEFOO_1 | 2561691 | 2562545 | aadK | ARO:3002627 | aadK | 100.00 | 100.00 | AL009126.1 |
| IGBBEFOO_1 | 2542982 | 2544184 | blt | ARO:3003006 | blt | 100.00 | 100.00 | L32599.1 |
| IGBBEFOO_1 | 2320663 | 2321832 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| IGBBEFOO_1 | 1202868 | 1203185 | ykkD | ARO:3003064 | ykkD | 100.00 | 100.00 | AL009126.1 |
| IGBBEFOO_1 | 1202530 | 1202868 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| IGBBEFOO_1 | 742795 | 745365 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 100.00 | 100.00 | AL009126.3 |
| IGBBEFOO_1 | 430755 | 432398 | vmlR | ARO:3004476 | vmlR | 100.00 | 100.00 | NC_000964.3 |
| IGBBEFOO_1 | 223786 | 224568 | ANT(9)-Ia | ARO:3002630 | ANT(9)-Ia | 100.00 | 100.00 | X02588.1 |
| IGBBEFOO_1 | 162825 | 163418 | tmrB | ARO:3003059 | tmrB | 100.00 | 100.00 | AL009126.3 |
| IGBBEFOO_1 | 112323 | 113756 | lmrB | ARO:3002813 | lmrB | 100.00 | 100.00 | JYFL01000006.1 |
| IGBBEFOO_1 | 99508 | 100428 | mphK | ARO:3004541 | mphK | 100.00 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| IGBBEFOO_1 | 2561691 | 2562545 | aadK | Streptomycin | 100.00 | 100.00 | M26879 |
| IGBBEFOO_1 | 223786 | 224568 | ant(9)-Ia | Spectinomycin | 100.00 | 100.00 | X02588 |
| IGBBEFOO_1 | 99508 | 100428 | mph(K) | Spiramycin, Telithromycin | 100.00 | 100.00 | NC_000964 |
| IGBBEFOO_1 | 4013718 | 4015094 | tet(L) | Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline | 100.00 | 100.00 | X08034 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IGBBEFOO_1 | 2561694 | 2562545 | aadK | aminoglycoside 6-adenylyltransferase AadK | EXACTX | 100.00 | 100.00 | WP_003229862.1 |
| IGBBEFOO_1 | 223786 | 224565 | ant(9)-Ia | aminoglycoside nucleotidyltransferase ANT(9)-Ia | EXACTX | 100.00 | 100.00 | WP_000067268.1 |
| IGBBEFOO_1 | 99508 | 100425 | mphK | macrolide 2'-phosphotransferase MphK | EXACTX | 100.00 | 100.00 | WP_003246254.1 |
| IGBBEFOO_1 | 4011200 | 4011718 | satA | streptothricin N-acetyltransferase SatA | EXACTX | 100.00 | 100.00 | WP_003242546.1 |
| IGBBEFOO_1 | 4013721 | 4015094 | tet(L) | tetracycline efflux MFS transporter Tet(L) | EXACTX | 100.00 | 100.00 | WP_003242953.1 |
| IGBBEFOO_1 | 430758 | 432398 | vmlR | ABC-F type ribosomal protection protein VmlR | EXACTX | 100.00 | 100.00 | WP_003234144.1 |
| IGBBEFOO_1 | 1877349 | 1879943 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 81.15 | 99.88 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| IGBBEFOO_1 | 3523857 | 3524999 | capA | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391469 |
| IGBBEFOO_1 | 3525482 | 3526663 | capB | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391471 |
| IGBBEFOO_1 | 3525018 | 3525467 | capC | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391470 |
| IGBBEFOO_1 | 1830691 | 1832454 | dep/capD | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_389723 |
| IGBBEFOO_1 | 3117521 | 3118306 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391080 |
| IGBBEFOO_1 | 3113685 | 3114623 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391077 |
| IGBBEFOO_1 | 3116299 | 3117495 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391079 |
| IGBBEFOO_1 | 3114651 | 3116270 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391078 |
| IGBBEFOO_1 | 3106529 | 3113665 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391076 |
| IGBBEFOO_1 | 2121317 | 2121958 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 100.00 | 100.00 | NP_390062 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| IGBBEFOO_3 | 27975 | 26839 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| IGBBEFOO_1 | 4060717 | 4061586 | pdxS | 3.07e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| IGBBEFOO_1 | 1516132 | 1516908 | CodY | 3.35e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| IGBBEFOO_1 | 3372245 | 3372814 | ClpP | 2.49e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |