Genome ID：GCA_030769525.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
11	10	9	17.38

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
LGCOMDED_5	93432	93749	ykkD	ARO:3003064	ykkD	98.10	100.00	AL009126.1
LGCOMDED_5	93094	93432	ykkC	ARO:3003063	ykkC	99.11	100.00	AL009126.1
LGCOMDED_45	54822	56261	lmrB	ARO:3002813	lmrB	98.74	100.42	JYFL01000006.1
LGCOMDED_37	20003	20857	aadK	ARO:3002627	aadK	97.54	100.00	AL009126.1
LGCOMDED_32	13548	15194	vmlR	ARO:3004476	vmlR	98.54	100.18	NC_000964.3
LGCOMDED_4	9325	11895	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	99.77	100.00	AL009126.3
LGCOMDED_89	8997	10166	bmr	ARO:3003007	bmr	99.49	100.00	M33768.1
LGCOMDED_37	1239	2441	blt	ARO:3003006	blt	100.00	100.00	L32599.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
LGCOMDED_9	50683	52059	tet(L)	Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline	98.77	100.00	D12567
LGCOMDED_37	20005	20857	aadK	Streptomycin	98.48	99.77	M26879
LGCOMDED_45	42018	42937	mph(K)	Spiramycin, Telithromycin	97.61	99.89	NC_000964

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
LGCOMDED_9	50686	52059	tet(L)	tetracycline efflux MFS transporter Tet(L)	BLASTX	98.69	100.00	WP_063856081.1
LGCOMDED_32	13551	15194	vmlR	ABC-F type ribosomal protection protein VmlR	BLASTX	98.54	100.00	WP_003234144.1
LGCOMDED_37	20006	20857	aadK	aminoglycoside 6-adenylyltransferase AadK	BLASTX	97.54	100.00	WP_003229862.1
LGCOMDED_9	48190	48708	satA	streptothricin N-acetyltransferase SatA	BLASTX	90.17	100.00	WP_003242546.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
LGCOMDED_23	30875	31813	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	99.68	100.00	NP_391077
LGCOMDED_30	3247	4428	capB	0.0	Capsule	Immune modulation	99.66	100.00	NP_391471
LGCOMDED_30	1622	2764	capA	0.0	Capsule	Immune modulation	99.56	100.00	NP_391469
LGCOMDED_30	2783	3232	capC	0.0	Capsule	Immune modulation	99.56	100.00	NP_391470
LGCOMDED_23	34700	35485	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	99.36	100.00	NP_391080
LGCOMDED_8	1856	3619	dep/capD	0.0	Capsule	Immune modulation	99.09	100.00	NP_389723
LGCOMDED_23	23719	30855	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	98.78	100.00	NP_391076
LGCOMDED_23	33478	34674	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	98.58	100.00	NP_391079
LGCOMDED_12	21390	22031	hlyIII	0.0	Hemolysin III	Exotoxin	97.82	100.00	NP_390062
LGCOMDED_23	31841	33460	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	97.72	100.00	NP_391078

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
LGCOMDED_17	31673	32809	tufA	0.0	elongation factor Tu	85.75	95.69	AHM69299
LGCOMDED_53	11121	10252	pdxS	1.92e-151	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.45	98.31	ACE61268
LGCOMDED_1	112550	111774	CodY	2.13e-125	nutrient-responsive regulator	81.08	100.00	ACJ80679
LGCOMDED_78	84824	85393	ClpP	6.88e-100	part of proteolytic complex	81.05	97.44	BAB94595
LGCOMDED_41	23404	23012	spxA1	2.09e-71	redox-responsive transcription factor	83.97	100.00	AAF21893
LGCOMDED_41	23404	23012	spx	1.25e-69	essential gene which is a thiol/oxidative stress sensor	80.15	100.00	BAB57159
LGCOMDED_24	20471	20713	SpoVG	7.47e-39	RNA-binding protein	81.48	79.41	AAT02994
LGCOMDED_38	3967	4164	CspA	1.64e-32	cold shock protein	90.91	100.00	CAA62903
LGCOMDED_39	31156	30962	CspB	3.22e-28	cold shock protein	83.08	98.48	CAD00094
LGCOMDED_12	33883	34077	CspD	5.14e-28	cold shock protein	80.00	98.48	CAC99957