Genome ID:GCA_031119145.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
4235.39

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
No hit found

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
HEMLNNMD_130676433068692cfr(B)Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin88.7799.90KR610408
HEMLNNMD_111178101119186tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline87.15100.00X08034

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
HEMLNNMD_130676433068689clbA23S rRNA (adenine(2503)-C(8))-methyltransferase ClbAINTERNAL_STOP92.55100.00WP_012116915.1
HEMLNNMD_111178161119186tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX86.8799.78WP_003242953.1
HEMLNNMD_130653813065899satAstreptothricin N-acetyltransferase SatABLASTX85.55100.00WP_003242546.1
HEMLNNMD_1506778509375rphCrifamycin-inactivating phosphotransferase RphCBLASTX81.17100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
HEMLNNMD_120622312063412capB0.0CapsuleImmune modulation82.1299.66NP_391471
HEMLNNMD_120617672062216capC1.49e-113CapsuleImmune modulation83.5999.78NP_391470

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
HEMLNNMD_126750292676165tufA0.0elongation factor Tu86.5495.69AHM69299
HEMLNNMD_125601842561053pdxS1.58e-150encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS84.8398.31ACE61268
HEMLNNMD_1299093299869CodY3.32e-124nutrient-responsive regulator81.08100.00ACJ80679