Genome ID:GCA_032555955.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 12 | 0 | 1 | 12.04 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IPBPBBMI_12 | 53186 | 55324 | vanT gene in vanG cluster | ARO:3002972 | vanT_in_vanG_cl | 100.00 | 100.00 | DQ212986.1 |
| IPBPBBMI_12 | 52429 | 53193 | vanXY gene in vanG cluster | ARO:3003069 | vanXY_in_vanG | 100.00 | 100.00 | DQ212986.1 |
| IPBPBBMI_12 | 51383 | 52432 | vanG | ARO:3002909 | vanG | 100.00 | 100.00 | DQ212986.1 |
| IPBPBBMI_12 | 50545 | 51381 | vanW gene in vanG cluster | ARO:3002965 | vanW_in_vanG_cl | 99.64 | 98.93 | DQ212986.1 |
| IPBPBBMI_12 | 49621 | 50460 | vanY gene in vanG cluster | ARO:3002959 | vanY_in_vanG_cl | 100.00 | 100.00 | DQ212986.1 |
| IPBPBBMI_12 | 48378 | 49484 | vanS gene in vanG cluster | ARO:3002937 | vanS_in_vanG_cl | 100.00 | 102.17 | DQ212986.1 |
| IPBPBBMI_12 | 47657 | 48364 | vanR gene in vanG cluster | ARO:3002926 | vanR_in_vanG_cl | 100.00 | 100.00 | DQ212986.1 |
| IPBPBBMI_12 | 47428 | 47655 | vanU gene in vanG cluster | ARO:3004253 | vanU_in_vanG_cl | 100.00 | 100.00 | DQ212986.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| IPBPBBMI_87 | 2028 | 2894 | ant(6)-Ia | Streptomycin | 100.00 | 100.00 | KF864551 |
| IPBPBBMI_12 | 51383 | 53193 | VanGXY | Vancomycin | 100.00 | 100.00 | AY271782 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IPBPBBMI_87 | 2028 | 2891 | aadE | aminoglycoside 6-adenylyltransferase AadE | EXACTX | 100.00 | 100.00 | WP_001255868.1 |
| IPBPBBMI_12 | 51383 | 52429 | vanG | D-alanine--D-serine ligase VanG | EXACTX | 100.00 | 100.00 | WP_021418924.1 |
| IPBPBBMI_12 | 47657 | 48361 | vanR-G | vancomycin resistance response regulator transcription factor VanR-G | EXACTX | 100.00 | 100.00 | WP_021418928.1 |
| IPBPBBMI_12 | 48378 | 49481 | vanS-G | vancomycin resistance histidine kinase VanS-G | EXACTX | 100.00 | 100.00 | WP_021418927.1 |
| IPBPBBMI_12 | 53186 | 55321 | vanT-G | membrane-bound serine racemase VanT-G | EXACTX | 100.00 | 100.00 | WP_021418922.1 |
| IPBPBBMI_12 | 47428 | 47652 | vanU-G | glycopeptide resistance transcriptional regulator VanU-G | EXACTX | 100.00 | 100.00 | WP_021418929.1 |
| IPBPBBMI_12 | 50536 | 51378 | vanW-G | glycopeptide resistance accessory protein VanW-G | EXACTX | 100.00 | 100.00 | WP_021419095.1 |
| IPBPBBMI_12 | 52429 | 53190 | vanXY | D-Ala-D-Ala dipeptidase/D-Ala-D-Ala carboxypeptidase VanXY-G | EXACTX | 100.00 | 100.00 | WP_063856782.1 |
| IPBPBBMI_12 | 49621 | 50457 | vanY-G1 | D-Ala-D-Ala carboxypeptidase VanY-G1 | EXACTX | 100.00 | 100.00 | WP_021418926.1 |
| IPBPBBMI_101 | 488 | 1183 | vanR-D | vancomycin resistance response regulator transcription factor VanR-D | BLASTX | 82.33 | 99.57 | WP_063856722.1 |
| IPBPBBMI_101 | 1200 | 1400 | vanU-G | glycopeptide resistance transcriptional regulator VanU-G | PARTIALX | 80.60 | 89.33 | WP_021418929.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| IPBPBBMI_155 | 1124 | 495 | Rex | 4.08e-137 | global redox-sensing regulator | 100.00 | 100.00 | CAJ66992 |