Genome ID:GCA_032878855.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 13 | 10 | 4 | 16.88 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CKPLAKGK_1 | 2735277 | 2736131 | aadK | ARO:3002627 | aadK | 100.00 | 100.00 | AL009126.1 |
| CKPLAKGK_1 | 2716568 | 2717770 | blt | ARO:3003006 | blt | 100.00 | 100.00 | L32599.1 |
| CKPLAKGK_1 | 2494249 | 2495418 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| CKPLAKGK_1 | 1376452 | 1376769 | ykkD | ARO:3003064 | ykkD | 100.00 | 100.00 | AL009126.1 |
| CKPLAKGK_1 | 1376114 | 1376452 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| CKPLAKGK_1 | 916373 | 918943 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 100.00 | 100.00 | AL009126.3 |
| CKPLAKGK_1 | 604333 | 605976 | vmlR | ARO:3004476 | vmlR | 100.00 | 100.00 | NC_000964.3 |
| CKPLAKGK_1 | 338754 | 339347 | tmrB | ARO:3003059 | tmrB | 100.00 | 100.00 | AL009126.3 |
| CKPLAKGK_1 | 288251 | 289684 | lmrB | ARO:3002813 | lmrB | 100.00 | 100.00 | JYFL01000006.1 |
| CKPLAKGK_1 | 275436 | 276356 | mphK | ARO:3004541 | mphK | 100.00 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| CKPLAKGK_1 | 2735277 | 2736131 | aadK | Streptomycin | 100.00 | 100.00 | M26879 |
| CKPLAKGK_1 | 275436 | 276356 | mph(K) | Spiramycin, Telithromycin | 100.00 | 100.00 | NC_000964 |
| CKPLAKGK_1 | 4251207 | 4252583 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 100.00 | 100.00 | X08034 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CKPLAKGK_1 | 2735280 | 2736131 | aadK | aminoglycoside 6-adenylyltransferase AadK | EXACTX | 100.00 | 100.00 | WP_003229862.1 |
| CKPLAKGK_1 | 275436 | 276353 | mphK | macrolide 2'-phosphotransferase MphK | EXACTX | 100.00 | 100.00 | WP_003246254.1 |
| CKPLAKGK_1 | 4248689 | 4249207 | satA | streptothricin N-acetyltransferase SatA | EXACTX | 100.00 | 100.00 | WP_003242546.1 |
| CKPLAKGK_1 | 4251210 | 4252583 | tet(L) | tetracycline efflux MFS transporter Tet(L) | EXACTX | 100.00 | 100.00 | WP_003242953.1 |
| CKPLAKGK_1 | 604336 | 605976 | vmlR | ABC-F type ribosomal protection protein VmlR | EXACTX | 100.00 | 100.00 | WP_003234144.1 |
| CKPLAKGK_1 | 2050934 | 2053528 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 81.15 | 99.88 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| CKPLAKGK_1 | 3761599 | 3762741 | capA | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391469 |
| CKPLAKGK_1 | 3763224 | 3764405 | capB | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391471 |
| CKPLAKGK_1 | 3762760 | 3763209 | capC | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391470 |
| CKPLAKGK_1 | 2004276 | 2006039 | dep/capD | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_389723 |
| CKPLAKGK_1 | 3355264 | 3356049 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391080 |
| CKPLAKGK_1 | 3351428 | 3352366 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391077 |
| CKPLAKGK_1 | 3354042 | 3355238 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391079 |
| CKPLAKGK_1 | 3352394 | 3354013 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391078 |
| CKPLAKGK_1 | 3344272 | 3351408 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391076 |
| CKPLAKGK_1 | 2294902 | 2295543 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 100.00 | 100.00 | NP_390062 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| CKPLAKGK_1 | 132472 | 133608 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| CKPLAKGK_1 | 18664 | 19533 | pdxS | 3.18e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| CKPLAKGK_1 | 1689716 | 1690492 | CodY | 3.47e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| CKPLAKGK_1 | 3609987 | 3610556 | ClpP | 2.57e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |