Genome ID:GCA_032911345.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 9 | 10 | 9 | 16.19 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DAPKMJLA_4 | 101490 | 101807 | ykkD | ARO:3003064 | ykkD | 98.10 | 100.00 | AL009126.1 |
| DAPKMJLA_4 | 101152 | 101490 | ykkC | ARO:3003063 | ykkC | 99.11 | 100.00 | AL009126.1 |
| DAPKMJLA_11 | 40995 | 41915 | mphK | ARO:3004541 | mphK | 98.68 | 100.00 | CP010314.1 |
| DAPKMJLA_32 | 30628 | 31830 | blt | ARO:3003006 | blt | 99.25 | 100.00 | L32599.1 |
| DAPKMJLA_11 | 27662 | 29101 | lmrB | ARO:3002813 | lmrB | 98.74 | 100.42 | JYFL01000006.1 |
| DAPKMJLA_28 | 15581 | 17227 | vmlR | ARO:3004476 | vmlR | 98.36 | 100.18 | NC_000964.3 |
| DAPKMJLA_34 | 9453 | 12023 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.65 | 100.00 | AL009126.3 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| DAPKMJLA_14 | 34916 | 36292 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.13 | 100.00 | D12567 |
| DAPKMJLA_11 | 40995 | 41915 | mph(K) | Spiramycin, Telithromycin | 98.05 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DAPKMJLA_14 | 34916 | 36289 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 99.13 | 100.00 | WP_063856081.1 |
| DAPKMJLA_11 | 41007 | 41915 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 98.68 | 99.02 | WP_003246254.1 |
| DAPKMJLA_28 | 15584 | 17227 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.36 | 100.00 | WP_003234144.1 |
| DAPKMJLA_14 | 38294 | 38812 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 90.75 | 100.00 | WP_003242546.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| DAPKMJLA_7 | 113972 | 115153 | capB | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | NP_391471 |
| DAPKMJLA_12 | 36147 | 36932 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.62 | 100.00 | NP_391080 |
| DAPKMJLA_7 | 115636 | 116778 | capA | 0.0 | Capsule | Immune modulation | 99.30 | 100.00 | NP_391469 |
| DAPKMJLA_12 | 32311 | 33249 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.15 | 100.00 | NP_391077 |
| DAPKMJLA_40 | 23585 | 25348 | dep/capD | 0.0 | Capsule | Immune modulation | 98.98 | 100.00 | NP_389723 |
| DAPKMJLA_13 | 97037 | 97678 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 98.91 | 100.00 | NP_390062 |
| DAPKMJLA_7 | 115168 | 115617 | capC | 0.0 | Capsule | Immune modulation | 98.89 | 100.00 | NP_391470 |
| DAPKMJLA_12 | 25155 | 32291 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.61 | 100.00 | NP_391076 |
| DAPKMJLA_12 | 34925 | 36121 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.83 | 100.00 | NP_391079 |
| DAPKMJLA_12 | 33277 | 34896 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.10 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DAPKMJLA_20 | 31777 | 32913 | tufA | 0.0 | elongation factor Tu | 85.75 | 95.69 | AHM69299 |
| DAPKMJLA_45 | 11278 | 10409 | pdxS | 1.12e-151 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| DAPKMJLA_3 | 195983 | 196759 | CodY | 1.68e-125 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| DAPKMJLA_10 | 99297 | 98728 | ClpP | 8.98e-100 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| DAPKMJLA_27 | 23406 | 23798 | spxA1 | 3.31e-71 | redox-responsive transcription factor | 83.97 | 100.00 | AAF21893 |
| DAPKMJLA_27 | 23406 | 23798 | spx | 1.98e-69 | essential gene which is a thiol/oxidative stress sensor | 80.15 | 100.00 | BAB57159 |
| DAPKMJLA_24 | 20599 | 20841 | SpoVG | 7.52e-39 | RNA-binding protein | 81.48 | 79.41 | AAT02994 |
| DAPKMJLA_51 | 5268 | 5465 | CspA | 2.68e-33 | cold shock protein | 90.91 | 100.00 | CAA62903 |
| DAPKMJLA_13 | 85807 | 85613 | CspD | 7.80e-29 | cold shock protein | 81.54 | 98.48 | CAC99957 |
| DAPKMJLA_5 | 162912 | 163106 | CspB | 1.79e-27 | cold shock protein | 83.08 | 98.48 | CAD00094 |