Genome ID:GCA_033100155.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 13 | 10 | 4 | 16.88 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ABANGKPK_1 | 3758186 | 3758779 | tmrB | ARO:3003059 | tmrB | 98.48 | 100.00 | AL009126.3 |
| ABANGKPK_1 | 3562854 | 3564497 | vmlR | ARO:3004476 | vmlR | 98.54 | 100.00 | NC_000964.3 |
| ABANGKPK_1 | 3385843 | 3387276 | lmrB | ARO:3002813 | lmrB | 99.37 | 100.00 | JYFL01000006.1 |
| ABANGKPK_1 | 3373030 | 3373950 | mphK | ARO:3004541 | mphK | 98.69 | 100.00 | CP010314.1 |
| ABANGKPK_1 | 3113927 | 3116497 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.77 | 100.00 | AL009126.3 |
| ABANGKPK_1 | 2565166 | 2565504 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| ABANGKPK_1 | 2564849 | 2565166 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| ABANGKPK_1 | 1660920 | 1662089 | bmr | ARO:3003007 | bmr | 99.49 | 100.00 | M33768.1 |
| ABANGKPK_1 | 1463838 | 1465040 | blt | ARO:3003006 | blt | 99.75 | 100.00 | L32599.1 |
| ABANGKPK_1 | 1435141 | 1435995 | aadK | ARO:3002627 | aadK | 98.24 | 100.00 | AL009126.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| ABANGKPK_1 | 1435141 | 1435993 | aadK | Streptomycin | 98.59 | 99.77 | M26879 |
| ABANGKPK_1 | 1024238 | 1025614 | tet(L) | Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline | 98.40 | 100.00 | X08034 |
| ABANGKPK_1 | 3373030 | 3373950 | mph(K) | Spiramycin, Telithromycin | 98.37 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ABANGKPK_1 | 3373030 | 3373947 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 98.69 | 100.00 | WP_003246254.1 |
| ABANGKPK_1 | 3562854 | 3564494 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.54 | 100.00 | WP_003234144.1 |
| ABANGKPK_1 | 1024241 | 1025614 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 98.47 | 100.00 | WP_003242953.1 |
| ABANGKPK_1 | 1435141 | 1435992 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.24 | 100.00 | WP_003229862.1 |
| ABANGKPK_1 | 1021767 | 1022285 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 90.17 | 100.00 | WP_003242546.1 |
| ABANGKPK_1 | 1963354 | 1965951 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 80.83 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| ABANGKPK_1 | 529869 | 531050 | capB | 0.0 | Capsule | Immune modulation | 99.58 | 100.00 | NP_391471 |
| ABANGKPK_1 | 113020 | 113805 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.49 | 100.00 | NP_391080 |
| ABANGKPK_1 | 528244 | 529386 | capA | 0.0 | Capsule | Immune modulation | 99.47 | 100.00 | NP_391469 |
| ABANGKPK_1 | 109184 | 110122 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.47 | 100.00 | NP_391077 |
| ABANGKPK_1 | 1860720 | 1861361 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.38 | 100.00 | NP_390062 |
| ABANGKPK_1 | 529405 | 529854 | capC | 0.0 | Capsule | Immune modulation | 99.33 | 100.00 | NP_391470 |
| ABANGKPK_1 | 2014817 | 2016580 | dep/capD | 0.0 | Capsule | Immune modulation | 99.21 | 100.00 | NP_389723 |
| ABANGKPK_1 | 102028 | 109164 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.16 | 100.00 | NP_391076 |
| ABANGKPK_1 | 111798 | 112994 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.83 | 100.00 | NP_391079 |
| ABANGKPK_1 | 110150 | 111769 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.46 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| ABANGKPK_1 | 3901207 | 3902343 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| ABANGKPK_1 | 4032970 | 4033839 | pdxS | 3.04e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| ABANGKPK_1 | 2255382 | 2254606 | CodY | 3.32e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| ABANGKPK_1 | 364744 | 365313 | ClpP | 2.46e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |