Genome ID:GCA_033238785.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 12 | 10 | 7 | 17.12 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LENEAMHB_1 | 624584 | 625438 | aadK | ARO:3002627 | aadK | 98.59 | 100.00 | AL009126.1 |
| LENEAMHB_1 | 606004 | 607206 | blt | ARO:3003006 | blt | 99.00 | 100.00 | L32599.1 |
| LENEAMHB_1 | 432727 | 433896 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| LENEAMHB_2 | 431042 | 431359 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| LENEAMHB_2 | 430704 | 431042 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| LENEAMHB_5 | 276501 | 279071 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.77 | 100.00 | AL009126.3 |
| LENEAMHB_6 | 190934 | 192580 | vmlR | ARO:3004476 | vmlR | 98.91 | 100.18 | NC_000964.3 |
| LENEAMHB_7 | 108040 | 108960 | mphK | ARO:3004541 | mphK | 98.69 | 100.00 | CP010314.1 |
| LENEAMHB_7 | 94714 | 96147 | lmrB | ARO:3002813 | lmrB | 99.58 | 100.00 | JYFL01000006.1 |
| LENEAMHB_7 | 44997 | 45590 | tmrB | ARO:3003059 | tmrB | 98.48 | 100.00 | AL009126.3 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| LENEAMHB_7 | 108040 | 108960 | mph(K) | Spiramycin, Telithromycin | 99.35 | 100.00 | NC_000964 |
| LENEAMHB_1 | 624584 | 625438 | aadK | Streptomycin | 98.83 | 100.00 | M26879 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LENEAMHB_6 | 190937 | 192580 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.91 | 100.00 | WP_003234144.1 |
| LENEAMHB_7 | 108043 | 108960 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 98.69 | 100.00 | WP_003246254.1 |
| LENEAMHB_1 | 624587 | 625438 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.59 | 100.00 | WP_003229862.1 |
| LENEAMHB_4 | 38226 | 38744 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 93.64 | 100.00 | WP_003242546.1 |
| LENEAMHB_1 | 139046 | 141643 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 80.41 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| LENEAMHB_3 | 172113 | 173294 | capB | 0.0 | Capsule | Immune modulation | 99.75 | 100.00 | NP_391471 |
| LENEAMHB_1 | 235425 | 236066 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.69 | 100.00 | NP_390062 |
| LENEAMHB_3 | 575275 | 576060 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.49 | 100.00 | NP_391080 |
| LENEAMHB_3 | 576086 | 577282 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.33 | 100.00 | NP_391079 |
| LENEAMHB_1 | 93403 | 95166 | dep/capD | 0.0 | Capsule | Immune modulation | 98.98 | 100.00 | NP_389723 |
| LENEAMHB_3 | 173777 | 174919 | capA | 0.0 | Capsule | Immune modulation | 98.95 | 100.00 | NP_391469 |
| LENEAMHB_3 | 173309 | 173758 | capC | 0.0 | Capsule | Immune modulation | 98.89 | 100.00 | NP_391470 |
| LENEAMHB_3 | 578958 | 579896 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.62 | 100.00 | NP_391077 |
| LENEAMHB_3 | 579916 | 587052 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.53 | 100.00 | NP_391076 |
| LENEAMHB_3 | 577311 | 578930 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 96.97 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| LENEAMHB_10 | 31768 | 32904 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| LENEAMHB_13 | 11248 | 10379 | pdxS | 1.12e-151 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| LENEAMHB_2 | 742529 | 743305 | CodY | 7.83e-125 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| LENEAMHB_3 | 315293 | 314724 | ClpP | 4.14e-99 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| LENEAMHB_2 | 275324 | 275716 | spxA1 | 6.15e-70 | redox-responsive transcription factor | 83.97 | 100.00 | AAF21893 |
| LENEAMHB_2 | 275324 | 275716 | spx | 3.67e-68 | essential gene which is a thiol/oxidative stress sensor | 80.15 | 100.00 | BAB57159 |
| LENEAMHB_11 | 34759 | 34517 | SpoVG | 7.52e-39 | RNA-binding protein | 81.48 | 79.41 | AAT02994 |
| LENEAMHB_6 | 144508 | 144705 | CspA | 9.58e-32 | cold shock protein | 90.91 | 100.00 | CAA62903 |