Genome ID：GCA_033436855.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
12	10	7	17.12

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
LMFDPJNC_8	610984	611838	aadK	ARO:3002627	aadK	97.54	100.00	AL009126.1
LMFDPJNC_8	591811	593013	blt	ARO:3003006	blt	99.75	100.00	L32599.1
LMFDPJNC_9	429022	429339	ykkD	ARO:3003064	ykkD	99.05	100.00	AL009126.1
LMFDPJNC_9	428684	429022	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
LMFDPJNC_8	362733	363902	bmr	ARO:3003007	bmr	99.74	100.00	M33768.1
LMFDPJNC_11	197977	199620	vmlR	ARO:3004476	vmlR	98.35	100.00	NC_000964.3
LMFDPJNC_12	113659	115098	lmrB	ARO:3002813	lmrB	99.16	100.42	JYFL01000006.1
LMFDPJNC_12	100843	101763	mphK	ARO:3004541	mphK	97.71	100.00	CP010314.1
LMFDPJNC_10	28905	31475	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	99.88	100.00	AL009126.3

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
LMFDPJNC_6	36108	37484	tet(L)	Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline	100.00	100.00	X08034
LMFDPJNC_8	610986	611838	aadK	Streptomycin	98.48	99.77	M26879
LMFDPJNC_12	100843	101763	mph(K)	Spiramycin, Telithromycin	97.50	100.00	NC_000964

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
LMFDPJNC_6	36108	37481	tet(L)	tetracycline efflux MFS transporter Tet(L)	EXACTX	100.00	100.00	WP_003242953.1
LMFDPJNC_11	197980	199620	vmlR	ABC-F type ribosomal protection protein VmlR	BLASTX	98.35	100.00	WP_003234144.1
LMFDPJNC_12	100843	101760	mphK	macrolide 2'-phosphotransferase MphK	BLASTX	97.71	100.00	WP_003246254.1
LMFDPJNC_8	610987	611838	aadK	aminoglycoside 6-adenylyltransferase AadK	BLASTX	97.54	100.00	WP_003229862.1
LMFDPJNC_6	39483	40001	satA	streptothricin N-acetyltransferase SatA	BLASTX	89.60	100.00	WP_003242546.1
LMFDPJNC_8	58977	61574	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	81.40	100.00	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
LMFDPJNC_8	163545	164186	hlyIII	0.0	Hemolysin III	Exotoxin	100.00	100.00	NP_390062
LMFDPJNC_6	529652	530833	capB	0.0	Capsule	Immune modulation	99.66	100.00	NP_391471
LMFDPJNC_8	8952	10715	dep/capD	0.0	Capsule	Immune modulation	99.49	100.00	NP_389723
LMFDPJNC_7	282249	283034	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	99.36	100.00	NP_391080
LMFDPJNC_7	285932	286870	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	99.36	100.00	NP_391077
LMFDPJNC_7	283060	284256	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	99.17	100.00	NP_391079
LMFDPJNC_7	286890	294024	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	99.06	99.97	NP_391076
LMFDPJNC_6	531316	532458	capA	0.0	Capsule	Immune modulation	98.95	100.00	NP_391469
LMFDPJNC_6	530848	531297	capC	0.0	Capsule	Immune modulation	98.67	100.00	NP_391470
LMFDPJNC_7	284285	285904	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	98.52	100.00	NP_391078

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
LMFDPJNC_14	29571	28435	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
LMFDPJNC_1	7039	7908	pdxS	1.43e-151	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
LMFDPJNC_9	738920	739696	CodY	8.52e-125	nutrient-responsive regulator	81.08	100.00	ACJ80679
LMFDPJNC_7	29869	29300	ClpP	2.38e-99	part of proteolytic complex	81.05	97.44	BAB94595
LMFDPJNC_9	276407	276799	spxA1	6.69e-70	redox-responsive transcription factor	83.97	100.00	AAF21893
LMFDPJNC_9	276407	276799	spx	3.99e-68	essential gene which is a thiol/oxidative stress sensor	80.15	100.00	BAB57159
LMFDPJNC_15	36228	35986	SpoVG	8.08e-39	RNA-binding protein	81.48	79.41	AAT02994
LMFDPJNC_11	147165	147362	CspA	9.88e-32	cold shock protein	90.91	100.00	CAA62903