Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 1 | 3.16 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LJDMPFFM_45 | 3035 | 4960 | tet(Q) | ARO:3000191 | tet(Q) | 90.17 | 97.56 | Z21523.1 |
| LJDMPFFM_45 | 1161 | 2297 | tet(X) | ARO:3000205 | tet(X) | 99.74 | 97.42 | M37699.1 |
| LJDMPFFM_45 | 148 | 948 | ErmF | ARO:3000498 | ErmF | 99.62 | 100.00 | M17124.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| LJDMPFFM_45 | 148 | 948 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 100.00 | M17808 |
| LJDMPFFM_45 | 1161 | 2327 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.91 | 100.00 | M37699 |
| LJDMPFFM_45 | 3035 | 4960 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 91.18 | 99.95 | L33696 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LJDMPFFM_45 | 148 | 945 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | EXACTX | 100.00 | 100.00 | WP_002682030.1 |
| LJDMPFFM_45 | 1164 | 2327 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | BLASTX | 99.74 | 100.00 | WP_008651082.1 |
| LJDMPFFM_45 | 3038 | 4960 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 90.64 | 100.00 | WP_063856407.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| LJDMPFFM_51 | 73305 | 71725 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |