Genome ID:GCA_034132865.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 1 | 3.16 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HDFIAMEC_43 | 567546 | 568751 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.00 | 100.00 | AF251288.1 |
| HDFIAMEC_4 | 75283 | 76248 | CfxA2 | ARO:3003002 | CfxA2 | 100.00 | 100.00 | AF118110.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| HDFIAMEC_4 | 75283 | 76248 | cfxA3 | Ampicillin | 99.90 | 100.00 | AF472622 |
| HDFIAMEC_4 | 75283 | 76248 | cfxA4 | Unknown Beta-lactam | 99.90 | 100.00 | AY769933 |
| HDFIAMEC_4 | 75283 | 76248 | cfxA5 | Unknown Beta-lactam | 99.90 | 100.00 | AY769934 |
| HDFIAMEC_4 | 75283 | 76248 | cfxA | Cefoxitin, Ampicillin | 99.90 | 100.00 | U38243 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HDFIAMEC_4 | 75286 | 76248 | cfxA | CfxA family broad-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_004339683.1 |
| HDFIAMEC_43 | 567012 | 567521 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | EXACTX | 100.00 | 100.00 | WP_004308783.1 |
| HDFIAMEC_43 | 567549 | 568751 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.00 | 100.00 | WP_063853729.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| HDFIAMEC_34 | 164707 | 163127 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |