Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 0 | 1 | 4.12 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| APHGKKAL_5 | 152652 | 153140 | nimE | ARO:3007107 | nimE | 81.48 | 95.29 | CP036548.1 |
| APHGKKAL_62 | 30297 | 31502 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.00 | 100.00 | AF251288.1 |
| APHGKKAL_12 | 17661 | 19586 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| APHGKKAL_12 | 17661 | 19586 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.79 | 100.00 | L33696 |
| APHGKKAL_5 | 152652 | 153131 | nimE | Metronidazole | 81.46 | 93.57 | AM042593 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| APHGKKAL_62 | 31527 | 32036 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | EXACTX | 100.00 | 100.00 | WP_004308783.1 |
| APHGKKAL_12 | 17664 | 19586 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| APHGKKAL_62 | 30297 | 31499 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.00 | 100.00 | WP_063853729.1 |
| APHGKKAL_5 | 152652 | 153137 | nimE | 5-nitroimidazole reductase NimE | BLASTX | 81.48 | 95.29 | WP_005812773.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| APHGKKAL_29 | 18357 | 16777 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |