Genome ID:GCA_034259385.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1210817.55

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
OMGCKCJF_116683991668737ykkCARO:3003063ykkC100.00100.00AL009126.1
OMGCKCJF_116680821668399ykkDARO:3003064ykkD99.05100.00AL009126.1
OMGCKCJF_1653206654375bmrARO:3003007bmr99.49100.00M33768.1
OMGCKCJF_1445311446513bltARO:3003006blt98.75100.00L32599.1
OMGCKCJF_1428498429352aadKARO:3002627aadK98.94100.00AL009126.1
OMGCKCJF_3409978411624vmlRARO:3004476vmlR99.09100.18NC_000964.3
OMGCKCJF_3158938159531tmrBARO:3003059tmrB97.46100.00AL009126.3
OMGCKCJF_3108377109810lmrBARO:3002813lmrB99.58100.00JYFL01000006.1
OMGCKCJF_39556596485mphKARO:3004541mphK99.02100.00CP010314.1
OMGCKCJF_62744430017Bacillus subtilis mprFARO:3003324Bsub_mprF99.77100.12AL009126.3

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
OMGCKCJF_39556596485mph(K)Spiramycin, Telithromycin99.35100.00NC_000964
OMGCKCJF_1428498429352aadKStreptomycin98.95100.00M26879

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
OMGCKCJF_3409981411624vmlRABC-F type ribosomal protection protein VmlRBLASTX99.09100.00WP_003234144.1
OMGCKCJF_39556596482mphKmacrolide 2'-phosphotransferase MphKBLASTX99.02100.00WP_003246254.1
OMGCKCJF_1428498429349aadKaminoglycoside 6-adenylyltransferase AadKBLASTX98.94100.00WP_003229862.1
OMGCKCJF_53822038738satAstreptothricin N-acetyltransferase SatABLASTX93.06100.00WP_003242546.1
OMGCKCJF_1942233944830rphCrifamycin-inactivating phosphotransferase RphCBLASTX80.60100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
OMGCKCJF_1851035851676hlyIII0.0Hemolysin IIIExotoxin99.84100.00NP_390062
OMGCKCJF_2166424167605capB0.0CapsuleImmune modulation99.75100.00NP_391471
OMGCKCJF_2594534595730dhbC0.0BacillibactinNutritional/Metabolic factor99.42100.00NP_391079
OMGCKCJF_2593723594508dhbA0.0BacillibactinNutritional/Metabolic factor99.36100.00NP_391080
OMGCKCJF_2597406598344dhbB0.0BacillibactinNutritional/Metabolic factor99.15100.00NP_391077
OMGCKCJF_1997246999009dep/capD0.0CapsuleImmune modulation99.04100.00NP_389723
OMGCKCJF_2168088169230capA0.0CapsuleImmune modulation98.95100.00NP_391469
OMGCKCJF_2167620168069capC0.0CapsuleImmune modulation98.89100.00NP_391470
OMGCKCJF_2598364605500dhbF0.0BacillibactinNutritional/Metabolic factor98.82100.00NP_391076
OMGCKCJF_2595759597378dhbE0.0BacillibactinNutritional/Metabolic factor97.04100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
OMGCKCJF_73176732903tufA0.0elongation factor Tu84.9695.69AHM69299
OMGCKCJF_943915260pdxS1.12e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
OMGCKCJF_113569291356153CodY1.39e-124nutrient-responsive regulator81.08100.00ACJ80679
OMGCKCJF_2328434327865ClpP4.25e-99part of proteolytic complex81.0597.44BAB94595
OMGCKCJF_4141806141414spxA12.67e-70redox-responsive transcription factor83.97100.00AAF21893
OMGCKCJF_4141806141414spx1.59e-68essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
OMGCKCJF_82062420866SpoVG7.53e-39RNA-binding protein81.4879.41AAT02994
OMGCKCJF_3361266361463CspA1.90e-31cold shock protein90.91100.00CAA62903
OMGCKCJF_4387302387496CspB3.84e-27cold shock protein83.0898.48CAD00094