Genome ID:GCA_035319605.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 10 | 10 | 4 | 14.70 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OIJMMPIG_1 | 3903962 | 3905395 | lmrB | ARO:3002813 | lmrB | 98.95 | 100.00 | JYFL01000006.1 |
| OIJMMPIG_1 | 3854088 | 3854681 | tmrB | ARO:3003059 | tmrB | 99.49 | 100.00 | AL009126.3 |
| OIJMMPIG_1 | 3305811 | 3308381 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.77 | 100.00 | AL009126.3 |
| OIJMMPIG_1 | 2811043 | 2811381 | ykkC | ARO:3003063 | ykkC | 98.21 | 100.00 | AL009126.1 |
| OIJMMPIG_1 | 2810726 | 2811043 | ykkD | ARO:3003064 | ykkD | 98.10 | 100.00 | AL009126.1 |
| OIJMMPIG_1 | 1680216 | 1681070 | aadK | ARO:3002627 | aadK | 98.94 | 100.00 | AL009126.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| OIJMMPIG_1 | 1680216 | 1681070 | aadK | Streptomycin | 98.83 | 100.00 | M26879 |
| OIJMMPIG_1 | 3917290 | 3918048 | mph(K) | Spiramycin, Telithromycin | 97.63 | 82.41 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OIJMMPIG_1 | 1680216 | 1681067 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.94 | 100.00 | WP_003229862.1 |
| OIJMMPIG_1 | 3917302 | 3918048 | mphK | macrolide 2'-phosphotransferase MphK | PARTIALX | 98.39 | 81.37 | WP_003246254.1 |
| OIJMMPIG_1 | 3598211 | 3599818 | vmlR | ABC-F type ribosomal protection protein VmlR | INTERNAL_STOP | 95.61 | 100.00 | WP_003234144.1 |
| OIJMMPIG_1 | 28744 | 29262 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 91.91 | 100.00 | WP_003242546.1 |
| OIJMMPIG_1 | 2351502 | 2354099 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 80.48 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| OIJMMPIG_1 | 518094 | 519275 | capB | 0.0 | Capsule | Immune modulation | 99.49 | 100.00 | NP_391471 |
| OIJMMPIG_1 | 985378 | 986163 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.49 | 100.00 | NP_391080 |
| OIJMMPIG_1 | 519758 | 520900 | capA | 0.0 | Capsule | Immune modulation | 99.30 | 100.00 | NP_391469 |
| OIJMMPIG_1 | 989061 | 989999 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.15 | 100.00 | NP_391077 |
| OIJMMPIG_1 | 986189 | 987385 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.08 | 100.00 | NP_391079 |
| OIJMMPIG_1 | 2111566 | 2112207 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 98.91 | 100.00 | NP_390062 |
| OIJMMPIG_1 | 519290 | 519739 | capC | 0.0 | Capsule | Immune modulation | 98.89 | 100.00 | NP_391470 |
| OIJMMPIG_1 | 990019 | 997155 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.66 | 100.00 | NP_391076 |
| OIJMMPIG_1 | 2298699 | 2300451 | dep/capD | 0.0 | Capsule | Immune modulation | 98.30 | 99.94 | NP_389723 |
| OIJMMPIG_1 | 987414 | 989033 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.04 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OIJMMPIG_1 | 4040176 | 4039040 | tufA | 0.0 | elongation factor Tu | 85.75 | 95.69 | AHM69299 |
| OIJMMPIG_1 | 4154072 | 4153203 | pdxS | 5.54e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.45 | 98.31 | ACE61268 |
| OIJMMPIG_1 | 2500533 | 2499757 | CodY | 3.39e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| OIJMMPIG_1 | 674700 | 674131 | ClpP | 2.51e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |