Genome ID:GCA_035600155.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
2244.90

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
DILIEIMO_116287711629820clbAARO:3002814clbA99.71100.00CP006845.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
DILIEIMO_116287711629806cfr(B)Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin89.0998.67KR610408
DILIEIMO_136031783604554tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline86.86100.00X08034

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
DILIEIMO_116287711629817clbA23S rRNA (adenine(2503)-C(8))-methyltransferase ClbABLASTX99.71100.00WP_012116915.1
DILIEIMO_136031843604554tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX86.2199.78WP_003242953.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
DILIEIMO_1573682574863capB0.0CapsuleImmune modulation81.8799.75NP_391471
DILIEIMO_1573218573667capC3.18e-115CapsuleImmune modulation83.8199.78NP_391470

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
DILIEIMO_111918011192937tufA0.0elongation factor Tu86.8195.69AHM69299
DILIEIMO_110770151077884pdxS9.96e-150encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS84.8398.31ACE61268
DILIEIMO_126942612695037CodY4.73e-124nutrient-responsive regulator81.08100.00ACJ80679
DILIEIMO_1203376202504lipA (SAUSA300_0829)1.29e-161lipoic acid synthetase80.8295.41ABD22039