Genome ID:GCA_035621695.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 9 | 10 | 4 | 14.04 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PJOJEMMK_1 | 3240601 | 3240918 | ykkD | ARO:3003064 | ykkD | 98.10 | 100.00 | AL009126.1 |
| PJOJEMMK_1 | 3240263 | 3240601 | ykkC | ARO:3003063 | ykkC | 98.21 | 100.00 | AL009126.1 |
| PJOJEMMK_1 | 2740379 | 2742949 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.77 | 100.00 | AL009126.3 |
| PJOJEMMK_1 | 2154507 | 2155100 | tmrB | ARO:3003059 | tmrB | 99.49 | 100.00 | AL009126.3 |
| PJOJEMMK_1 | 2105346 | 2106779 | lmrB | ARO:3002813 | lmrB | 98.95 | 100.00 | JYFL01000006.1 |
| PJOJEMMK_1 | 212296 | 213150 | aadK | ARO:3002627 | aadK | 98.94 | 100.00 | AL009126.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| PJOJEMMK_1 | 212296 | 213150 | aadK | Streptomycin | 98.83 | 100.00 | M26879 |
| PJOJEMMK_1 | 2092693 | 2093451 | mph(K) | Spiramycin, Telithromycin | 97.63 | 82.41 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PJOJEMMK_1 | 212299 | 213150 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.94 | 100.00 | WP_003229862.1 |
| PJOJEMMK_1 | 2092693 | 2093439 | mphK | macrolide 2'-phosphotransferase MphK | PARTIALX | 98.39 | 81.37 | WP_003246254.1 |
| PJOJEMMK_1 | 2410953 | 2412560 | vmlR | ABC-F type ribosomal protection protein VmlR | INTERNAL_STOP | 95.61 | 100.00 | WP_003234144.1 |
| PJOJEMMK_1 | 1808263 | 1808781 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 91.91 | 100.00 | WP_003242546.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| PJOJEMMK_1 | 1313947 | 1315128 | capB | 0.0 | Capsule | Immune modulation | 99.49 | 100.00 | NP_391471 |
| PJOJEMMK_1 | 844169 | 844954 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.49 | 100.00 | NP_391080 |
| PJOJEMMK_1 | 1312322 | 1313464 | capA | 0.0 | Capsule | Immune modulation | 99.30 | 100.00 | NP_391469 |
| PJOJEMMK_1 | 840333 | 841271 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.15 | 100.00 | NP_391077 |
| PJOJEMMK_1 | 842947 | 844143 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.08 | 100.00 | NP_391079 |
| PJOJEMMK_1 | 3912310 | 3912951 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 98.91 | 100.00 | NP_390062 |
| PJOJEMMK_1 | 1313483 | 1313932 | capC | 0.0 | Capsule | Immune modulation | 98.89 | 100.00 | NP_391470 |
| PJOJEMMK_1 | 833177 | 840313 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.66 | 100.00 | NP_391076 |
| PJOJEMMK_1 | 3729749 | 3731501 | dep/capD | 0.0 | Capsule | Immune modulation | 98.30 | 99.94 | NP_389723 |
| PJOJEMMK_1 | 841299 | 842918 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.04 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| PJOJEMMK_1 | 1970564 | 1971700 | tufA | 0.0 | elongation factor Tu | 85.75 | 95.69 | AHM69299 |
| PJOJEMMK_1 | 1856668 | 1857537 | pdxS | 5.38e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.45 | 98.31 | ACE61268 |
| PJOJEMMK_1 | 3552425 | 3553201 | CodY | 3.35e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| PJOJEMMK_1 | 1155630 | 1156199 | ClpP | 2.49e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |