Genome ID:GCA_035758325.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 34 | 28 | 44.05 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| APIMJJON_1 | 43663 | 44502 | cbpD | 0.0 | Autolysin | Exoenzyme | 100.00 | 100.00 | WP_011226733 |
| APIMJJON_1 | 1038335 | 1039125 | cshA | 0.0 | Cell surface hydrophobicity proteins | Adherence | 100.00 | 100.00 | - |
| APIMJJON_1 | 1308822 | 1309673 | rfbD | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_014621820 |
| APIMJJON_1 | 1119748 | 1120509 | srtA | 0.0 | Sortase A | Exoenzyme | 100.00 | 100.00 | - |
| APIMJJON_1 | 962124 | 963047 | STR_RS05205 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227237 |
| APIMJJON_1 | 963007 | 963957 | STR_RS05210 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227238 |
| APIMJJON_1 | 963982 | 965064 | STR_RS05215 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227239 |
| APIMJJON_1 | 965154 | 966128 | STR_RS05220 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227240 |
| APIMJJON_1 | 966134 | 966613 | STR_RS05225 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_041827041 |
| APIMJJON_1 | 966806 | 967924 | STR_RS05230 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_148148887 |
| APIMJJON_1 | 968492 | 969451 | STR_RS05240 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_041827042 |
| APIMJJON_1 | 969615 | 970214 | STR_RS05245 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_196767671 |
| APIMJJON_1 | 970351 | 971100 | STR_RS05250 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227246 |
| APIMJJON_1 | 971110 | 971802 | STR_RS05255 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227247 |
| APIMJJON_1 | 971811 | 972542 | STR_RS05260 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227248 |
| APIMJJON_1 | 972543 | 973997 | STR_RS05265 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_041827043 |
| APIMJJON_1 | 1084391 | 1084984 | STR_RS05880 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226149 |
| APIMJJON_1 | 1296344 | 1298089 | STR_RS06885 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227426 |
| APIMJJON_1 | 1298091 | 1299791 | STR_RS06890 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_041827077 |
| APIMJJON_1 | 1299809 | 1301011 | STR_RS06895 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227428 |
| APIMJJON_1 | 1301011 | 1301817 | STR_RS06900 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227429 |
| APIMJJON_1 | 1301817 | 1302758 | STR_RS06905 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227430 |
| APIMJJON_1 | 1302755 | 1303903 | STR_RS06910 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227431 |
| APIMJJON_1 | 957943 | 959001 | waaB | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_157822584 |
| APIMJJON_1 | 856603 | 858261 | fbp54 | 0.0 | FBPs | Adherence | 99.94 | 100.00 | WP_011227179 |
| APIMJJON_1 | 960695 | 962116 | STR_RS05200 | 0.0 | Capsule | Immune modulation | 99.93 | 100.00 | WP_011227236 |
| APIMJJON_1 | 1084391 | 1084984 | STER_RS06030 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011226149 |
| APIMJJON_1 | 1084391 | 1084984 | STU_RS15260 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011226149 |
| APIMJJON_1 | 1298091 | 1299791 | STER_RS07050 | 0.0 | Capsule | Immune modulation | 99.71 | 100.00 | WP_041827753 |
| APIMJJON_1 | 1301011 | 1301817 | STER_RS07060 | 0.0 | Capsule | Immune modulation | 99.50 | 100.00 | WP_011681437 |
| APIMJJON_1 | 1301817 | 1302758 | STER_RS07065 | 0.0 | Capsule | Immune modulation | 99.47 | 100.00 | WP_011681438 |
| APIMJJON_1 | 1299809 | 1301011 | STER_RS07055 | 0.0 | Capsule | Immune modulation | 99.42 | 100.00 | WP_011681436 |
| APIMJJON_1 | 971110 | 971802 | STU_RS14640 | 0.0 | Capsule | Immune modulation | 99.42 | 100.00 | WP_011226047 |
| APIMJJON_1 | 1302755 | 1303903 | STER_RS07070 | 0.0 | Capsule | Immune modulation | 99.22 | 100.00 | WP_011681439 |
| APIMJJON_1 | 1084984 | 1085853 | rfbA | 0.0 | Capsule | Immune modulation | 99.19 | 100.00 | WP_011681286 |
| APIMJJON_1 | 971811 | 972542 | STU_RS14645 | 0.0 | Capsule | Immune modulation | 98.77 | 100.00 | WP_011226048 |
| APIMJJON_1 | 970365 | 971100 | STER_RS05305 | 0.0 | Capsule | Immune modulation | 98.50 | 99.33 | WP_011681174 |
| APIMJJON_1 | 971811 | 972542 | STER_RS05315 | 0.0 | Capsule | Immune modulation | 98.22 | 100.00 | WP_011681176 |
| APIMJJON_1 | 1296344 | 1298089 | STER_RS07045 | 0.0 | Capsule | Immune modulation | 98.22 | 100.00 | WP_011681434 |
| APIMJJON_1 | 970365 | 971100 | STU_RS14635 | 0.0 | Capsule | Immune modulation | 97.96 | 99.33 | WP_011226046 |
| APIMJJON_1 | 972543 | 973997 | STU_RS14650 | 0.0 | Capsule | Immune modulation | 97.94 | 100.00 | WP_011226049 |
| APIMJJON_1 | 1307442 | 1308701 | STER_RS07100 | 0.0 | Capsule | Immune modulation | 97.70 | 100.00 | WP_011681445 |
| APIMJJON_1 | 972543 | 973997 | STER_RS05320 | 0.0 | Capsule | Immune modulation | 96.92 | 99.79 | WP_011681177 |
| APIMJJON_1 | 971110 | 971802 | STER_RS05310 | 0.0 | Capsule | Immune modulation | 89.61 | 100.00 | WP_011681175 |
| APIMJJON_1 | 589970 | 591273 | eno | 0.0 | Streptococcal enolase | Exoenzyme | 88.09 | 99.54 | WP_000022832 |
| APIMJJON_1 | 1589397 | 1590407 | plr/gapA | 0.0 | Streptococcal plasmin receptor/GAPDH | Adherence | 86.92 | 99.51 | WP_002986042 |
| APIMJJON_1 | 1301011 | 1301817 | SGO_RS05020 | 0.0 | Capsule | Immune modulation | 82.90 | 100.00 | WP_012000440 |
| APIMJJON_1 | 143231 | 144514 | tig/ropA | 0.0 | Trigger factor | Stress survival | 80.65 | 99.77 | WP_000107753 |
| APIMJJON_1 | 1082916 | 1083962 | rfbB | 0.0 | Capsule | Immune modulation | 80.61 | 100.00 | WP_009659423 |
| APIMJJON_1 | 1306747 | 1307445 | STER_RS07095 | 2.92e-152 | Capsule | Immune modulation | 81.15 | 70.35 | WP_011681444 |
| APIMJJON_1 | 968200 | 968436 | STR_RS05235* | 6.59e-119 | Capsule | Immune modulation | 100.00 | 100.00 | - |
| APIMJJON_1 | 1305927 | 1306393 | STER_RS07085 | 0.0 | Capsule | Immune modulation | 94.02 | 65.13 | WP_011681442 |
| APIMJJON_1 | 1300274 | 1301011 | SGO_RS05025 | 0.0 | Capsule | Immune modulation | 85.23 | 60.29 | WP_012000441 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| APIMJJON_1 | 1123196 | 1124179 | ldh(Sp_1220) | 0.0 | L-lactate dehydrogenase | 94.82 | 100.00 | AAK75326 |
| APIMJJON_1 | 702345 | 703418 | MntE | 0.0 | manganese homeostasis | 94.41 | 99.72 | ABF32167 |
| APIMJJON_1 | 507734 | 508702 | spr0084 | 0.0 | pathogenitcity related | 93.19 | 98.48 | AAK98888 |
| APIMJJON_1 | 1471007 | 1473310 | pfl2(Sp_0459) | 0.0 | formate acetyltransferase | 92.97 | 99.22 | AAK74619 |
| APIMJJON_1 | 1210057 | 1211538 | SPD_0310 | 0.0 | UPF0371 protein SPD_0310 | 92.11 | 100.00 | ABJ54480 |
| APIMJJON_1 | 731026 | 733272 | metE | 0.0 | methionine biosynthesis enzymes | 91.99 | 100.00 | AAK74738 |
| APIMJJON_1 | 63294 | 64286 | recA | 0.0 | DNA recombination and repair | 91.24 | 85.31 | AAL00560 |
| APIMJJON_1 | 27181 | 28152 | prsA2 | 0.0 | ribose-phosphate pyrophosphokinase | 90.12 | 100.00 | ABF36968 |
| APIMJJON_1 | 1357176 | 1356025 | potA | 0.0 | ABC transporter ATP-binding protein-spermidine/putrescine transport | 89.06 | 99.74 | AAL00050 |
| APIMJJON_1 | 1322703 | 1320721 | uvrB | 0.0 | excinuclease ABC, B subunit | 88.96 | 99.70 | AE014259_2 |
| APIMJJON_1 | 1107002 | 1105272 | ptsI | 0.0 | phosphoenolpyruvate-protein phosphotransferase | 87.69 | 100.00 | AAK34199 |
| APIMJJON_1 | 1778923 | 1777445 | IMPDH | 0.0 | inosine-5'-monophosphate dehydrogenase | 87.63 | 100.00 | ADE32434 |
| APIMJJON_1 | 589970 | 591271 | Eno | 0.0 | enolase | 86.21 | 99.77 | ABP90468 |
| APIMJJON_1 | 1764187 | 1762295 | gidA | 0.0 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme | 85.89 | 98.90 | ABP91129 |
| APIMJJON_1 | 736197 | 734488 | PGM | 0.0 | phosphoglucomutase | 83.89 | 99.65 | ACH87041 |
| APIMJJON_1 | 1631088 | 1632098 | pdh | 0.0 | pyruvate dehydrogenase | 83.09 | 99.70 | ABP91006 |
| APIMJJON_1 | 880049 | 878688 | mnmE | 0.0 | central tRNA-modifying GTPase | 82.24 | 99.56 | ABP90420 |
| APIMJJON_1 | 1681419 | 1679527 | PepO | 0.0 | endopeptidase | 80.03 | 100.00 | ABF32980 |
| APIMJJON_1 | 575540 | 576430 | bglB | 2.81e-178 | putative phospho--glucosidase | 88.55 | 99.66 | AAK33487 |
| APIMJJON_1 | 795596 | 794661 | SP_0676 | 7.13e-168 | transcription facot | 81.73 | 96.89 | AAK74821 |
| APIMJJON_1 | 733464 | 734321 | metF | 8.35e-165 | methionine biosynthesis enzymes | 86.36 | 99.31 | AAK74739 |
| APIMJJON_1 | 1010635 | 1009931 | covR | 3.38e-130 | responder protein | 84.68 | 100.00 | AAK71319 |
| APIMJJON_1 | 1176378 | 1175707 | rr01 | 1.16e-125 | response regulator | 84.38 | 99.56 | CAB54566 |
| APIMJJON_1 | 1010635 | 1009931 | walR | 2.43e-120 | DNA-binding response regulator | 80.85 | 100.00 | ANC99504 |
| APIMJJON_1 | 294658 | 295344 | CovR | 9.72e-118 | serves to repress GAS virulence factor-encoding genes | 80.79 | 100.00 | ACE75886 |
| APIMJJON_1 | 740150 | 740800 | CiaR | 1.34e-116 | two-component response regulator | 86.17 | 96.88 | AAK74935 |
| APIMJJON_1 | 740150 | 740800 | ciaR | 6.88e-114 | two component system response regulator | 83.87 | 96.02 | AIK75708 |
| APIMJJON_1 | 64583 | 64978 | SpxA2 | 3.58e-74 | transcriptional regulator | 90.91 | 100.00 | ERL21461 |
| APIMJJON_1 | 144672 | 145172 | RopE (M5005_Spy_1611) | 9.54e-75 | probable DNA-directed RNA polymerase subunit delta | 80.84 | 87.43 | AAK34603 |
| APIMJJON_1 | 1471007 | 1473304 | PFL (B9H01_RS01125) | 0.0 | formate C-acetyltransferase | 82.94 | 98.08 | MYN69560 |
| APIMJJON_1 | 1666958 | 1665939 | ilvC (SPD_0406) | 0.0 | ketol-acid reductoisomerase (NADP(+)) | 96.18 | 100.00 | ABJ55451 |