Genome ID:GCA_035804395.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 11 | 10 | 9 | 17.38 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IBIKFAKM_35 | 99474 | 99791 | ykkD | ARO:3003064 | ykkD | 98.10 | 100.00 | AL009126.1 |
| IBIKFAKM_35 | 99136 | 99474 | ykkC | ARO:3003063 | ykkC | 99.11 | 100.00 | AL009126.1 |
| IBIKFAKM_46 | 48046 | 49485 | lmrB | ARO:3002813 | lmrB | 98.74 | 100.42 | JYFL01000006.1 |
| IBIKFAKM_33 | 36410 | 38041 | vmlR | ARO:3004476 | vmlR | 98.34 | 99.27 | NC_000964.3 |
| IBIKFAKM_38 | 9250 | 10419 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| IBIKFAKM_37 | 6823 | 8025 | blt | ARO:3003006 | blt | 99.00 | 100.00 | L32599.1 |
| IBIKFAKM_68 | 6185 | 8755 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.77 | 100.00 | AL009126.3 |
| IBIKFAKM_46 | 1148 | 1741 | tmrB | ARO:3003059 | tmrB | 97.46 | 100.00 | AL009126.3 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| IBIKFAKM_14 | 76638 | 78014 | tet(L) | Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline | 98.47 | 100.00 | D12567 |
| IBIKFAKM_29 | 7167 | 8086 | mph(K) | Spiramycin, Telithromycin | 97.72 | 99.89 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IBIKFAKM_14 | 76641 | 78014 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 98.47 | 100.00 | WP_063856081.1 |
| IBIKFAKM_33 | 36398 | 38041 | vmlR | ABC-F type ribosomal protection protein VmlR | INTERNAL_STOP | 97.45 | 100.00 | WP_003234144.1 |
| IBIKFAKM_14 | 74118 | 74636 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 91.91 | 100.00 | WP_003242546.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| IBIKFAKM_41 | 30047 | 31228 | capB | 0.0 | Capsule | Immune modulation | 99.49 | 100.00 | NP_391471 |
| IBIKFAKM_22 | 34259 | 35044 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.36 | 100.00 | NP_391080 |
| IBIKFAKM_41 | 28422 | 29564 | capA | 0.0 | Capsule | Immune modulation | 99.21 | 100.00 | NP_391469 |
| IBIKFAKM_84 | 7179 | 8942 | dep/capD | 0.0 | Capsule | Immune modulation | 99.15 | 100.00 | NP_389723 |
| IBIKFAKM_41 | 29583 | 30032 | capC | 0.0 | Capsule | Immune modulation | 99.11 | 100.00 | NP_391470 |
| IBIKFAKM_22 | 33037 | 34233 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.08 | 100.00 | NP_391079 |
| IBIKFAKM_22 | 23267 | 30403 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.05 | 100.00 | NP_391076 |
| IBIKFAKM_22 | 30423 | 31361 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.98 | 100.00 | NP_391077 |
| IBIKFAKM_22 | 31389 | 33008 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.84 | 100.00 | NP_391078 |
| IBIKFAKM_43 | 23790 | 24431 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 97.82 | 100.00 | NP_390062 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| IBIKFAKM_30 | 28114 | 26978 | tufA | 0.0 | elongation factor Tu | 85.75 | 95.69 | AHM69299 |
| IBIKFAKM_88 | 4285 | 5154 | pdxS | 1.94e-151 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.45 | 98.31 | ACE61268 |
| IBIKFAKM_7 | 107287 | 106511 | CodY | 5.28e-125 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| IBIKFAKM_2 | 9560 | 8991 | ClpP | 2.64e-100 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| IBIKFAKM_58 | 24422 | 24814 | spxA1 | 4.16e-71 | redox-responsive transcription factor | 83.97 | 100.00 | AAF21893 |
| IBIKFAKM_58 | 24422 | 24814 | spx | 2.48e-69 | essential gene which is a thiol/oxidative stress sensor | 80.15 | 100.00 | BAB57159 |
| IBIKFAKM_39 | 34594 | 34352 | SpoVG | 7.48e-39 | RNA-binding protein | 81.48 | 79.41 | AAT02994 |
| IBIKFAKM_92 | 935 | 738 | CspA | 2.00e-33 | cold shock protein | 90.91 | 100.00 | CAA62903 |
| IBIKFAKM_43 | 12561 | 12367 | CspD | 3.50e-29 | cold shock protein | 81.54 | 98.48 | CAC99957 |
| IBIKFAKM_5 | 30141 | 29947 | CspB | 4.36e-28 | cold shock protein | 83.08 | 98.48 | CAD00094 |