Genome ID:GCA_035804415.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1110917.38

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
DODHPINN_236488165732aadKARO:3002627aadK97.8999.65AL009126.1
DODHPINN_536227262589ykkDARO:3003064ykkD98.10100.00AL009126.1
DODHPINN_536193462272ykkCARO:3003063ykkC98.21100.00AL009126.1
DODHPINN_64565647095lmrBARO:3002813lmrB98.74100.42JYFL01000006.1
DODHPINN_462725529825Bacillus subtilis mprFARO:3003324Bsub_mprF99.65100.00AL009126.3
DODHPINN_391888519478tmrBARO:3003059tmrB97.97100.00AL009126.3
DODHPINN_10368448046bltARO:3003006blt99.25100.00L32599.1
DODHPINN_5758897535vmlRARO:3004476vmlR98.18100.18NC_000964.3

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
DODHPINN_236488165732aadKStreptomycin98.3699.65M26879
DODHPINN_63284433763mph(K)Spiramycin, Telithromycin97.7299.89NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
DODHPINN_5758897532vmlRABC-F type ribosomal protection protein VmlRBLASTX98.18100.00WP_003234144.1
DODHPINN_236488165729aadKaminoglycoside 6-adenylyltransferase AadKBLASTX97.89100.00WP_003229862.1
DODHPINN_45815358671satAstreptothricin N-acetyltransferase SatABLASTX93.06100.00WP_003242546.1
DODHPINN_753907641673rphCrifamycin-inactivating phosphotransferase RphCBLASTX80.48100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
DODHPINN_442384225023capB0.0CapsuleImmune modulation99.66100.00NP_391471
DODHPINN_48143839144624dhbA0.0BacillibactinNutritional/Metabolic factor99.36100.00NP_391080
DODHPINN_442221723359capA0.0CapsuleImmune modulation99.30100.00NP_391469
DODHPINN_301229214055dep/capD0.0CapsuleImmune modulation99.09100.00NP_389723
DODHPINN_48140014140952dhbB0.0BacillibactinNutritional/Metabolic factor98.94100.00NP_391077
DODHPINN_442337823827capC0.0CapsuleImmune modulation98.89100.00NP_391470
DODHPINN_48142617143813dhbC0.0BacillibactinNutritional/Metabolic factor98.58100.00NP_391079
DODHPINN_48132858139994dhbF0.0BacillibactinNutritional/Metabolic factor98.56100.00NP_391076
DODHPINN_472903229673hlyIII0.0Hemolysin IIIExotoxin97.66100.00NP_390062
DODHPINN_48140980142599dhbE0.0BacillibactinNutritional/Metabolic factor97.28100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
DODHPINN_493165832794tufA0.0elongation factor Tu85.7595.69AHM69299
DODHPINN_891149610627pdxS6.93e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.4598.31ACE61268
DODHPINN_12112596111820CodY1.86e-125nutrient-responsive regulator81.08100.00ACJ80679
DODHPINN_327947378904ClpP6.83e-100part of proteolytic complex81.0597.44BAB94595
DODHPINN_268378084172spxA16.08e-71redox-responsive transcription factor83.97100.00AAF21893
DODHPINN_268378084172spx3.62e-69essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
DODHPINN_761106811310SpoVG6.22e-39RNA-binding protein81.4879.41AAT02994
DODHPINN_575132251125CspA2.45e-32cold shock protein90.91100.00CAA62903
DODHPINN_474090241096CspD7.80e-29cold shock protein81.5498.48CAC99957
DODHPINN_111722817422CspB4.41e-28cold shock protein83.0898.48CAD00094