Genome ID:GCA_035804435.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 11 | 10 | 9 | 17.38 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FJJECKHO_53 | 59557 | 59874 | ykkD | ARO:3003064 | ykkD | 98.10 | 100.00 | AL009126.1 |
| FJJECKHO_53 | 59219 | 59557 | ykkC | ARO:3003063 | ykkC | 98.21 | 100.00 | AL009126.1 |
| FJJECKHO_50 | 41821 | 44391 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.77 | 100.00 | AL009126.3 |
| FJJECKHO_11 | 17544 | 18977 | lmrB | ARO:3002813 | lmrB | 98.95 | 100.00 | JYFL01000006.1 |
| FJJECKHO_36 | 7180 | 7773 | tmrB | ARO:3003059 | tmrB | 99.49 | 100.00 | AL009126.3 |
| FJJECKHO_65 | 6534 | 7736 | blt | ARO:3003006 | blt | 99.25 | 100.00 | L32599.1 |
| FJJECKHO_11 | 4887 | 5651 | mphK | ARO:3004541 | mphK | 97.61 | 83.01 | CP010314.1 |
| FJJECKHO_70 | 3788 | 4642 | aadK | ARO:3002627 | aadK | 98.94 | 100.00 | AL009126.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| FJJECKHO_70 | 3788 | 4642 | aadK | Streptomycin | 98.83 | 100.00 | M26879 |
| FJJECKHO_11 | 4893 | 5651 | mph(K) | Spiramycin, Telithromycin | 97.63 | 82.41 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FJJECKHO_70 | 3791 | 4642 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.94 | 100.00 | WP_003229862.1 |
| FJJECKHO_11 | 4893 | 5639 | mphK | macrolide 2'-phosphotransferase MphK | PARTIALX | 98.39 | 81.37 | WP_003246254.1 |
| FJJECKHO_106 | 5908 | 7515 | vmlR | ABC-F type ribosomal protection protein VmlR | INTERNAL_STOP | 95.61 | 100.00 | WP_003234144.1 |
| FJJECKHO_25 | 37020 | 37538 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 91.91 | 100.00 | WP_003242546.1 |
| FJJECKHO_37 | 73498 | 76095 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 80.48 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| FJJECKHO_78 | 21515 | 22696 | capB | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | NP_391471 |
| FJJECKHO_63 | 103457 | 104242 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.49 | 100.00 | NP_391080 |
| FJJECKHO_78 | 23179 | 24321 | capA | 0.0 | Capsule | Immune modulation | 99.30 | 100.00 | NP_391469 |
| FJJECKHO_63 | 99621 | 100559 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.15 | 100.00 | NP_391077 |
| FJJECKHO_63 | 102235 | 103431 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.08 | 100.00 | NP_391079 |
| FJJECKHO_31 | 15364 | 16005 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 98.91 | 100.00 | NP_390062 |
| FJJECKHO_78 | 22711 | 23160 | capC | 0.0 | Capsule | Immune modulation | 98.89 | 100.00 | NP_391470 |
| FJJECKHO_63 | 92465 | 99601 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.66 | 100.00 | NP_391076 |
| FJJECKHO_37 | 20696 | 22448 | dep/capD | 0.0 | Capsule | Immune modulation | 98.36 | 99.94 | NP_389723 |
| FJJECKHO_63 | 100587 | 102206 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.04 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FJJECKHO_3 | 31842 | 32978 | tufA | 0.0 | elongation factor Tu | 85.75 | 95.69 | AHM69299 |
| FJJECKHO_6 | 11360 | 10491 | pdxS | 1.99e-151 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.45 | 98.31 | ACE61268 |
| FJJECKHO_35 | 96879 | 96103 | CodY | 2.05e-125 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| FJJECKHO_20 | 22551 | 21982 | ClpP | 7.68e-100 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| FJJECKHO_47 | 20150 | 20542 | spxA1 | 4.27e-71 | redox-responsive transcription factor | 83.97 | 100.00 | AAF21893 |
| FJJECKHO_47 | 20150 | 20542 | spx | 2.55e-69 | essential gene which is a thiol/oxidative stress sensor | 80.15 | 100.00 | BAB57159 |
| FJJECKHO_16 | 20603 | 20845 | SpoVG | 7.51e-39 | RNA-binding protein | 81.48 | 79.41 | AAT02994 |
| FJJECKHO_55 | 841 | 1038 | CspA | 1.28e-33 | cold shock protein | 90.91 | 100.00 | CAA62903 |
| FJJECKHO_31 | 27235 | 27429 | CspD | 6.95e-29 | cold shock protein | 81.54 | 98.48 | CAC99957 |
| FJJECKHO_30 | 25172 | 24978 | CspB | 4.62e-28 | cold shock protein | 83.08 | 98.48 | CAD00094 |